PlantSME Plant secondary metabolism enzyme database

Pyrus bretschneideri (pyrus_bretschneideri)

Imported from atlas release summary for Pyrus bretschneideri.

2763
Candidate Protein Records
2298
Pathway-Level Records
5664
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.72% Alkaloid pathway 23.32% Phenylpropanoid pathway 19.93% Flavonoid pathway 14.19% Rosmarinic acid pathway 7.22% Steroid pathway 5.61%
Family Distribution
C4H 6.18% C3'H/CYP98A 5.93% BAHD 5.4% UGT 4.82% 7DLGT 4.04% UFGT 3.94% IFS 3.9% CYP76 3.78%
Other Families 62.01%
More Families (96)
F3H 196 3.46% POD 194 3.43% 4CL 171 3.02% T3O 159 2.81% DWF4/CYP90B1 143 2.52% H6H 122 2.15% BR6OX2/CYP85A2 105 1.85% F3'H/CYP75B 100 1.77% NMT 99 1.75% CODM/T6ODM 98 1.73% STR 95 1.68% CAD 95 1.68% CAS 78 1.38% LAC 73 1.29% GS 70 1.24% IFR 63 1.11% IO 62 1.09% CYP71 62 1.09% SGD 61 1.08% PYKS 60 1.06% CSE 57 1.01% TPS 54 0.95% CYP90D1 52 0.92% TRI/TRII 51 0.9% GES 50 0.88% SMT1/SMT2/SMT3 46 0.81% 7DLH 45 0.79% G8O/G8H 45 0.79% F3'5'H/CYP75A 43 0.76% HCT 43 0.76% ANR 42 0.74% BBE 41 0.72% TAT 40 0.71% NCS 39 0.69% CCR 39 0.69% F5H/CYP84A 39 0.69% SLS 38 0.67% COMT 38 0.67% RAS 35 0.62% LAMT 32 0.56% PMT 31 0.55% T16H 30 0.53% BR6OX1/CYP85A1 28 0.49% DFR 26 0.46% 16OMT 25 0.44% FNS 25 0.44% COR 24 0.42% SQE 21 0.37% CHS 20 0.35% ANS/LDOX 18 0.32% CYP51G1 17 0.3% CYP719 16 0.28% 8HGO 15 0.26% MPO 14 0.25% AACT 14 0.25% ISY 11 0.19% ROT3/CYP90C1 11 0.19% CHI 10 0.18% FPPS 10 0.18% TYDC_DDC 9 0.16% PAL 9 0.16% CCoAOMT 9 0.16% CPD/CYP90A1 9 0.16% CNMT 8 0.14% HPPR 8 0.14% SQS/FDFT1 8 0.14% CYP80B1 7 0.12% CPR 7 0.12% GGPPS 7 0.12% SMO1/SMO2 6 0.11% CYP80F1 5 0.09% DWF7 5 0.09% HMGS 5 0.09% HMGR 5 0.09% MCT/IspD 5 0.09% MVD 5 0.09% DXS 5 0.09% TDC 4 0.07% CPI1 4 0.07% FK 4 0.07% MVK 4 0.07% PMK 4 0.07% DXR 4 0.07% FLS 3 0.05% DET2 3 0.05% HYD1 3 0.05% MDS/IspF 3 0.05% ODC 2 0.04% CMK/IspE 2 0.04% HDS/IspG 2 0.04% HDR/IspH 2 0.04% 6OMT_4OMT_SOMT 1 0.02% ADC 1 0.02% DWF5 1 0.02% DWF1 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 683 18 UGT (251) View species results
Alkaloid pathway 536 23 7DLGT (131) View species results
Phenylpropanoid pathway 458 12 POD (177) View species results
Flavonoid pathway 326 13 UFGT (211) View species results
Rosmarinic acid pathway 166 7 C4H (69) View species results
Steroid pathway 129 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2137 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 384 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pbre15G0004090 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Pbre15G0006360 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Pbre15G0007220 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Pbre15G0009760 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre15G0010810 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pbre15G0010820 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pbre15G0011790 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pbre15G0015160 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pbre15G0015420 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Pbre15G0015460 Terpenoid BAHD medium pass BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Pbre15G0016500 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Pbre15G0017900 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre15G0018250 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Pbre15G0019480 Terpenoid BAHD medium pass BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Pbre15G0020350 Terpenoid BAHD low borderline BAHD__00092__sp_Q9SU91_LPXA_ARATH
Pbre15G0021830 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Pbre15G0022100 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Pbre15G0022150 Terpenoid BAHD medium pass BAHD__00014__sp_B9RK42_GPC1_RICCO
Pbre15G0022960 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Pbre15G0023050 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Pbre15G0023640 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
Pbre15G0027830 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Pbre15G0030900 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
Pbre15G0040440 Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
Pbre16G0001020 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre16G0001030 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Pbre16G0001040 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre16G0001160 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre16G0001170 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre16G0001180 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre16G0004630 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Pbre16G0004800 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre16G0004810 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre16G0005570 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre16G0005970 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pbre16G0006390 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Pbre16G0015300 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Pbre17G0001430 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Pbre17G0002320 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pbre17G0002330 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pbre17G0002350 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pbre17G0002780 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Pbre17G0004180 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Pbre17G0004550 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Pbre17G0005260 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Pbre17G0006970 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pbre17G0009370 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Pbre17G0011160 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Pbre17G0013290 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pbre17G0013350 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH