PlantSME Plant secondary metabolism enzyme database

Pyrus bretschneideri (pyrus_bretschneideri)

Imported from atlas release summary for Pyrus bretschneideri.

2298
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 683 18 UGT (251) View species results
Alkaloid pathway 536 23 7DLGT (131) View species results
Phenylpropanoid pathway 458 12 POD (177) View species results
Flavonoid pathway 326 13 UFGT (211) View species results
Rosmarinic acid pathway 166 7 C4H (69) View species results
Steroid pathway 129 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2137 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 384 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status Best Target
Pbre01G0012590 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Pbre02G0014580 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre02G0014590 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre03G0011520 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre04G0010700 Rosmarinic Acid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
Pbre04G0010710 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pbre05G0001690 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre05G0005730 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pbre05G0019520 Rosmarinic Acid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
Pbre06G0001030 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pbre06G0011530 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Pbre06G0011580 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pbre07G0004440 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pbre07G0015150 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Pbre09G0000170 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre09G0000300 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre09G0000310 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre09G0001660 Rosmarinic Acid 4CL medium pass 4CL__00007__sp_Q42524_4CL1_ARATH
Pbre09G0008130 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pbre09G0014500 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre09G0014530 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre09G0020700 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pbre10G0002410 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre10G0003610 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Pbre10G0020780 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre11G0022080 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre13G0011320 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre13G0012370 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Pbre14G0001290 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pbre14G0009160 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pbre14G0010790 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pbre14G0010800 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pbre15G0002530 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pbre15G0018340 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre15G0018380 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre15G0032460 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pbre16G0001290 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pbre16G0001300 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pbre16G0002440 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Pbre16G0002470 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Pbre17G0001990 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pbre17G0003490 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre17G0003500 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre17G0003590 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pbre17G0007380 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pbre17G0011320 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pbre17G0016370 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pbre17G0020230 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Pbrescaffold1027.00001460 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pbrescaffold1149.00007480 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY