Pyrus bretschneideri (pyrus_bretschneideri)
Imported from atlas release summary for Pyrus bretschneideri.
2763
Candidate Protein Records
2298
Pathway-Level Records
5664
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5664
Family-Level Calls
C4H
6.18%
C3'H/CYP98A
5.93%
BAHD
5.4%
UGT
4.82%
7DLGT
4.04%
UFGT
3.94%
IFS
3.9%
CYP76
3.78%
Other Families
62.01%
More Families (96)
F3H
196
3.46%
POD
194
3.43%
4CL
171
3.02%
T3O
159
2.81%
DWF4/CYP90B1
143
2.52%
H6H
122
2.15%
BR6OX2/CYP85A2
105
1.85%
F3'H/CYP75B
100
1.77%
NMT
99
1.75%
CODM/T6ODM
98
1.73%
STR
95
1.68%
CAD
95
1.68%
CAS
78
1.38%
LAC
73
1.29%
GS
70
1.24%
IFR
63
1.11%
IO
62
1.09%
CYP71
62
1.09%
SGD
61
1.08%
PYKS
60
1.06%
CSE
57
1.01%
TPS
54
0.95%
CYP90D1
52
0.92%
TRI/TRII
51
0.9%
GES
50
0.88%
SMT1/SMT2/SMT3
46
0.81%
7DLH
45
0.79%
G8O/G8H
45
0.79%
F3'5'H/CYP75A
43
0.76%
HCT
43
0.76%
ANR
42
0.74%
BBE
41
0.72%
TAT
40
0.71%
NCS
39
0.69%
CCR
39
0.69%
F5H/CYP84A
39
0.69%
SLS
38
0.67%
COMT
38
0.67%
RAS
35
0.62%
LAMT
32
0.56%
PMT
31
0.55%
T16H
30
0.53%
BR6OX1/CYP85A1
28
0.49%
DFR
26
0.46%
16OMT
25
0.44%
FNS
25
0.44%
COR
24
0.42%
SQE
21
0.37%
CHS
20
0.35%
ANS/LDOX
18
0.32%
CYP51G1
17
0.3%
CYP719
16
0.28%
8HGO
15
0.26%
MPO
14
0.25%
AACT
14
0.25%
ISY
11
0.19%
ROT3/CYP90C1
11
0.19%
CHI
10
0.18%
FPPS
10
0.18%
TYDC_DDC
9
0.16%
PAL
9
0.16%
CCoAOMT
9
0.16%
CPD/CYP90A1
9
0.16%
CNMT
8
0.14%
HPPR
8
0.14%
SQS/FDFT1
8
0.14%
CYP80B1
7
0.12%
CPR
7
0.12%
GGPPS
7
0.12%
SMO1/SMO2
6
0.11%
CYP80F1
5
0.09%
DWF7
5
0.09%
HMGS
5
0.09%
HMGR
5
0.09%
MCT/IspD
5
0.09%
MVD
5
0.09%
DXS
5
0.09%
TDC
4
0.07%
CPI1
4
0.07%
FK
4
0.07%
MVK
4
0.07%
PMK
4
0.07%
DXR
4
0.07%
FLS
3
0.05%
DET2
3
0.05%
HYD1
3
0.05%
MDS/IspF
3
0.05%
ODC
2
0.04%
CMK/IspE
2
0.04%
HDS/IspG
2
0.04%
HDR/IspH
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
ADC
1
0.02%
DWF5
1
0.02%
DWF1
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 683 | 18 | UGT (251) | View species results |
| Alkaloid pathway | 536 | 23 | 7DLGT (131) | View species results |
| Phenylpropanoid pathway | 458 | 12 | POD (177) | View species results |
| Flavonoid pathway | 326 | 13 | UFGT (211) | View species results |
| Rosmarinic acid pathway | 166 | 7 | C4H (69) | View species results |
| Steroid pathway | 129 | 11 | CAS (63) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2137 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 384 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pbre15G0040140 | Rosmarinic Acid | C4H | medium | pass |
| Pbre15G0040160 | Rosmarinic Acid | C4H | medium | pass |
| Pbre15G0040170 | Rosmarinic Acid | C4H | medium | pass |
| Pbre15G0040180 | Rosmarinic Acid | C4H | low | borderline |
| Pbre15G0040870 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0000550 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0000560 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0000570 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0000580 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0000590 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007110 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007310 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007330 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007340 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007360 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007370 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007380 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007390 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007410 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007430 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007460 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007470 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007480 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0007530 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0007540 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0009980 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0010000 | Rosmarinic Acid | C4H | low | borderline |
| Pbre16G0013900 | Rosmarinic Acid | C4H | medium | pass |
| Pbre16G0015070 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0000270 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0003540 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0006000 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0006010 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0009400 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0016130 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0019990 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0020000 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0020010 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0020020 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0020030 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0020060 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0021680 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0021690 | Rosmarinic Acid | C4H | low | borderline |
| Pbre17G0021700 | Rosmarinic Acid | C4H | low | borderline |
| Pbrescaffold1001.00000280 | Rosmarinic Acid | C4H | low | borderline |
| Pbrescaffold1053.00003210 | Rosmarinic Acid | C4H | low | borderline |
| Pbrescaffold1110.00005440 | Rosmarinic Acid | C4H | low | borderline |
| Pbrescaffold1110.00005450 | Rosmarinic Acid | C4H | low | borderline |
| Pbrescaffold1135.00006570 | Rosmarinic Acid | C4H | medium | pass |
| Pbrescaffold1237.00012930 | Rosmarinic Acid | C4H | low | borderline |