PlantSME Plant secondary metabolism enzyme database

Pyrus bretschneideri (pyrus_bretschneideri)

Imported from atlas release summary for Pyrus bretschneideri.

2763
Candidate Protein Records
2298
Pathway-Level Records
5664
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 683 18 UGT (251) View species results
Alkaloid pathway 536 23 7DLGT (131) View species results
Phenylpropanoid pathway 458 12 POD (177) View species results
Flavonoid pathway 326 13 UFGT (211) View species results
Rosmarinic acid pathway 166 7 C4H (69) View species results
Steroid pathway 129 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2137 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 384 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pbrescaffold556.00046130 Phenylpropanoid F5H/CYP84A medium borderline
Pbrescaffold824.00063180 Phenylpropanoid F5H/CYP84A medium borderline
Pbrescaffold834.00063990 Phenylpropanoid F5H/CYP84A low borderline
Pbre01G0002500 Phenylpropanoid HCT low borderline
Pbre01G0006850 Phenylpropanoid HCT medium pass
Pbre01G0007440 Phenylpropanoid HCT low borderline
Pbre02G0001430 Phenylpropanoid HCT low borderline
Pbre02G0006540 Phenylpropanoid HCT low borderline
Pbre02G0017580 Phenylpropanoid HCT low borderline
Pbre03G0024530 Phenylpropanoid HCT medium pass
Pbre04G0003240 Phenylpropanoid HCT medium pass
Pbre04G0003260 Phenylpropanoid HCT medium pass
Pbre04G0003280 Phenylpropanoid HCT medium pass
Pbre04G0005530 Phenylpropanoid HCT low borderline
Pbre06G0000200 Phenylpropanoid HCT medium pass
Pbre06G0000370 Phenylpropanoid HCT medium pass
Pbre06G0016400 Phenylpropanoid HCT low borderline
Pbre06G0016410 Phenylpropanoid HCT low borderline
Pbre06G0016560 Phenylpropanoid HCT low borderline
Pbre07G0010300 Phenylpropanoid HCT medium pass
Pbre08G0006570 Phenylpropanoid HCT medium pass
Pbre09G0004110 Phenylpropanoid HCT medium pass
Pbre09G0015040 Phenylpropanoid HCT low borderline
Pbre09G0020600 Phenylpropanoid HCT medium pass
Pbre10G0010620 Phenylpropanoid HCT low borderline
Pbre10G0010630 Phenylpropanoid HCT low borderline
Pbre11G0009640 Phenylpropanoid HCT low borderline
Pbre11G0009670 Phenylpropanoid HCT low borderline
Pbre11G0021030 Phenylpropanoid HCT low borderline
Pbre12G0007110 Phenylpropanoid HCT low borderline
Pbre12G0017330 Phenylpropanoid HCT low borderline
Pbre14G0005910 Phenylpropanoid HCT low borderline
Pbre14G0007890 Phenylpropanoid HCT medium pass
Pbre15G0004090 Phenylpropanoid HCT low borderline
Pbre16G0001020 Phenylpropanoid HCT low borderline
Pbre16G0001170 Phenylpropanoid HCT low borderline
Pbre16G0001180 Phenylpropanoid HCT low borderline
Pbre17G0002320 Phenylpropanoid HCT medium pass
Pbre17G0002330 Phenylpropanoid HCT medium pass
Pbre17G0002350 Phenylpropanoid HCT medium pass
Pbre17G0020830 Phenylpropanoid HCT medium pass
Pbrescaffold449.00039420 Phenylpropanoid HCT low borderline
Pbrescaffold449.00039430 Phenylpropanoid HCT low borderline
Pbrescaffold54.10045170 Phenylpropanoid HCT low borderline
Pbrescaffold54.10045180 Phenylpropanoid HCT low borderline
Pbrescaffold751.00058640 Phenylpropanoid HCT medium pass
Pbre01G0004190 Phenylpropanoid LAC low borderline
Pbre01G0004200 Phenylpropanoid LAC low borderline
Pbre01G0004290 Phenylpropanoid LAC low borderline
Pbre01G0004300 Phenylpropanoid LAC low borderline