PlantSME Plant secondary metabolism enzyme database

Pyrus bretschneideri (pyrus_bretschneideri)

Imported from atlas release summary for Pyrus bretschneideri.

2763
Candidate Protein Records
2298
Pathway-Level Records
5664
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.72% Alkaloid pathway 23.32% Phenylpropanoid pathway 19.93% Flavonoid pathway 14.19% Rosmarinic acid pathway 7.22% Steroid pathway 5.61%
Family Distribution
C4H 6.18% C3'H/CYP98A 5.93% BAHD 5.4% UGT 4.82% 7DLGT 4.04% UFGT 3.94% IFS 3.9% CYP76 3.78%
Other Families 62.01%
More Families (96)
F3H 196 3.46% POD 194 3.43% 4CL 171 3.02% T3O 159 2.81% DWF4/CYP90B1 143 2.52% H6H 122 2.15% BR6OX2/CYP85A2 105 1.85% F3'H/CYP75B 100 1.77% NMT 99 1.75% CODM/T6ODM 98 1.73% STR 95 1.68% CAD 95 1.68% CAS 78 1.38% LAC 73 1.29% GS 70 1.24% IFR 63 1.11% IO 62 1.09% CYP71 62 1.09% SGD 61 1.08% PYKS 60 1.06% CSE 57 1.01% TPS 54 0.95% CYP90D1 52 0.92% TRI/TRII 51 0.9% GES 50 0.88% SMT1/SMT2/SMT3 46 0.81% 7DLH 45 0.79% G8O/G8H 45 0.79% F3'5'H/CYP75A 43 0.76% HCT 43 0.76% ANR 42 0.74% BBE 41 0.72% TAT 40 0.71% NCS 39 0.69% CCR 39 0.69% F5H/CYP84A 39 0.69% SLS 38 0.67% COMT 38 0.67% RAS 35 0.62% LAMT 32 0.56% PMT 31 0.55% T16H 30 0.53% BR6OX1/CYP85A1 28 0.49% DFR 26 0.46% 16OMT 25 0.44% FNS 25 0.44% COR 24 0.42% SQE 21 0.37% CHS 20 0.35% ANS/LDOX 18 0.32% CYP51G1 17 0.3% CYP719 16 0.28% 8HGO 15 0.26% MPO 14 0.25% AACT 14 0.25% ISY 11 0.19% ROT3/CYP90C1 11 0.19% CHI 10 0.18% FPPS 10 0.18% TYDC_DDC 9 0.16% PAL 9 0.16% CCoAOMT 9 0.16% CPD/CYP90A1 9 0.16% CNMT 8 0.14% HPPR 8 0.14% SQS/FDFT1 8 0.14% CYP80B1 7 0.12% CPR 7 0.12% GGPPS 7 0.12% SMO1/SMO2 6 0.11% CYP80F1 5 0.09% DWF7 5 0.09% HMGS 5 0.09% HMGR 5 0.09% MCT/IspD 5 0.09% MVD 5 0.09% DXS 5 0.09% TDC 4 0.07% CPI1 4 0.07% FK 4 0.07% MVK 4 0.07% PMK 4 0.07% DXR 4 0.07% FLS 3 0.05% DET2 3 0.05% HYD1 3 0.05% MDS/IspF 3 0.05% ODC 2 0.04% CMK/IspE 2 0.04% HDS/IspG 2 0.04% HDR/IspH 2 0.04% 6OMT_4OMT_SOMT 1 0.02% ADC 1 0.02% DWF5 1 0.02% DWF1 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 683 18 UGT (251) View species results
Alkaloid pathway 536 23 7DLGT (131) View species results
Phenylpropanoid pathway 458 12 POD (177) View species results
Flavonoid pathway 326 13 UFGT (211) View species results
Rosmarinic acid pathway 166 7 C4H (69) View species results
Steroid pathway 129 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2137 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 384 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Pbre11G0006480 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Pbre11G0006510 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Pbre11G0007730 Terpenoid BAHD medium pass BAHD__00094__sp_Q9SYC8_LPAT3_ARATH
Pbre11G0008810 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Pbre11G0009590 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Pbre11G0009640 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pbre11G0009670 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pbre11G0010730 Terpenoid BAHD medium pass BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Pbre11G0011950 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Pbre11G0021030 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre11G0021720 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre11G0022030 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Pbre12G0001270 Terpenoid BAHD medium pass BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Pbre12G0006700 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Pbre12G0007030 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Pbre12G0007110 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pbre12G0011910 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Pbre12G0012460 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre12G0013860 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Pbre12G0016910 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pbre12G0017330 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pbre13G0001050 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pbre13G0001220 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Pbre13G0004510 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Pbre13G0004520 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Pbre13G0006710 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Pbre13G0008110 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Pbre13G0008380 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre13G0009170 Terpenoid BAHD low borderline BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
Pbre13G0009590 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pbre13G0014200 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Pbre14G0003190 Terpenoid BAHD low borderline BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Pbre14G0003460 Terpenoid BAHD medium pass BAHD__00033__sp_P0DXG0_AT_STRYX
Pbre14G0004690 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Pbre14G0005910 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre14G0007890 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pbre14G0009880 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre14G0010070 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pbre15G0002380 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Pbre15G0002410 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Pbre15G0003650 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
Pbre15G0004090 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Pbre15G0006360 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Pbre15G0007220 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Pbre15G0009760 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pbre15G0010810 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pbre15G0010820 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pbre15G0011790 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pbre15G0015160 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pbre15G0015420 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH