Rheum tanguticum (rheum_tanguticum)
Imported from atlas release summary for Rheum tanguticum.
1471
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1471
Candidate Genes
C3'H/CYP98A
5.94%
C4H
5.77%
BAHD
5.09%
CYP76
4.52%
4CL
4.17%
IFS
4.03%
POD
3.76%
UGT
3.51%
Other Families
63.21%
More Families (97)
T3O
124
3.38%
7DLGT
113
3.08%
UFGT
106
2.89%
NMT
98
2.67%
DWF4/CYP90B1
87
2.37%
F3H
85
2.31%
BR6OX2/CYP85A2
79
2.15%
F3'H/CYP75B
76
2.07%
CAD
63
1.72%
PYKS
59
1.61%
STR
57
1.55%
CODM/T6ODM
56
1.53%
TPS
56
1.53%
CAS
55
1.5%
GES
51
1.39%
CYP71
50
1.36%
SMT1/SMT2/SMT3
49
1.33%
H6H
46
1.25%
CSE
43
1.17%
PAL
42
1.14%
GS
33
0.9%
TRI/TRII
31
0.84%
CHS
31
0.84%
HCT
31
0.84%
COMT
31
0.84%
SGD
30
0.82%
ANR
29
0.79%
IFR
29
0.79%
LAC
29
0.79%
RAS
29
0.79%
G8O/G8H
28
0.76%
PMT
28
0.76%
T16H
25
0.68%
CYP90D1
25
0.68%
CPD/CYP90A1
24
0.65%
IO
22
0.6%
7DLH
19
0.52%
16OMT
19
0.52%
CCR
19
0.52%
8HGO
18
0.49%
CYP719
18
0.49%
ANS/LDOX
18
0.49%
F5H/CYP84A
18
0.49%
TAT
18
0.49%
CPR
18
0.49%
SQE
15
0.41%
ROT3/CYP90C1
14
0.38%
SLS
13
0.35%
CYP51G1
13
0.35%
HMGR
12
0.33%
FPPS
12
0.33%
COR
11
0.3%
F3'5'H/CYP75A
11
0.3%
DFR
11
0.3%
SQS/FDFT1
11
0.3%
FNS
10
0.27%
CCoAOMT
10
0.27%
ISY
8
0.22%
BR6OX1/CYP85A1
8
0.22%
MVD
8
0.22%
NCS
7
0.19%
CNMT
7
0.19%
CHI
7
0.19%
SMO1/SMO2
7
0.19%
DXR
7
0.19%
BBE
6
0.16%
XMT_MXMT_DXMT
6
0.16%
HPPR
6
0.16%
HDS/IspG
6
0.16%
GGPPS
6
0.16%
CMK/IspE
5
0.14%
AACT
5
0.14%
DXS
5
0.14%
CYP80B1
4
0.11%
TYDC_DDC
4
0.11%
MPO
4
0.11%
DET2
4
0.11%
MVK
4
0.11%
HMGS
4
0.11%
LAMT
3
0.08%
TDC
3
0.08%
FK
3
0.08%
HYD1
3
0.08%
HDR/IspH
3
0.08%
IDI
3
0.08%
ODC
2
0.05%
6OMT_4OMT_SOMT
2
0.05%
FLS
2
0.05%
DWF1
2
0.05%
PMK
2
0.05%
CYP80F1
1
0.03%
ADC
1
0.03%
CPI1
1
0.03%
DWF7
1
0.03%
DWF5
1
0.03%
MDS/IspF
1
0.03%
MCT/IspD
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 440 | 19 | BAHD (137) | View species results |
| Phenylpropanoid pathway | 305 | 13 | POD (123) | View species results |
| Alkaloid pathway | 303 | 21 | NMT (50) | View species results |
| Flavonoid pathway | 184 | 12 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 147 | 7 | C4H (68) | View species results |
| Steroid pathway | 92 | 13 | CAS (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1403 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 247 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| rheum_tanguticum_RtaG0000191.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0000208.1 | Alkaloid | NMT | medium | borderline | NMT__00052__sp_Q9AVJ9_MXMT1_COFAR |
| rheum_tanguticum_RtaG0001080.1 | Alkaloid | NMT | low | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| rheum_tanguticum_RtaG0001096.1 | Alkaloid | NMT | low | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| rheum_tanguticum_RtaG0001156.1 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| rheum_tanguticum_RtaG0001210.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| rheum_tanguticum_RtaG0001428.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| rheum_tanguticum_RtaG0001558.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0001560.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0001563.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0001569.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0002919.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| rheum_tanguticum_RtaG0003438.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| rheum_tanguticum_RtaG0003440.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| rheum_tanguticum_RtaG0003619.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| rheum_tanguticum_RtaG0004391.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| rheum_tanguticum_RtaG0004705.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| rheum_tanguticum_RtaG0006383.1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| rheum_tanguticum_RtaG0007383.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| rheum_tanguticum_RtaG0008899.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| rheum_tanguticum_RtaG0009161.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| rheum_tanguticum_RtaG0010201.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0010206.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0010208.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0010396.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| rheum_tanguticum_RtaG0011089.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| rheum_tanguticum_RtaG0011194.1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| rheum_tanguticum_RtaG0011195.1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| rheum_tanguticum_RtaG0011291.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| rheum_tanguticum_RtaG0011956.1 | Alkaloid | NMT | low | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| rheum_tanguticum_RtaG0011957.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| rheum_tanguticum_RtaG0012133.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| rheum_tanguticum_RtaG0012918.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| rheum_tanguticum_RtaG0013118.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| rheum_tanguticum_RtaG0013599.1 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| rheum_tanguticum_RtaG0013931.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| rheum_tanguticum_RtaG0014110.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| rheum_tanguticum_RtaG0014256.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| rheum_tanguticum_RtaG0016010.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| rheum_tanguticum_RtaG0016608.1 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| rheum_tanguticum_RtaG0016633.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| rheum_tanguticum_RtaG0017261.1 | Alkaloid | NMT | medium | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| rheum_tanguticum_RtaG0017311.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| rheum_tanguticum_RtaG0017451.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| rheum_tanguticum_RtaG0017715.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| rheum_tanguticum_RtaG0018515.1 | Alkaloid | NMT | medium | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| rheum_tanguticum_RtaG0018572.1 | Alkaloid | NMT | medium | borderline | NMT__00029__sp_Q42963_PMT1_TOBAC |
| rheum_tanguticum_RtaG0019219.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| rheum_tanguticum_RtaG0020544.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| rheum_tanguticum_RtaG0021036.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |