PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2079
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rrug01G0011140.1 Flavonoid F3H medium borderline
Rrug01G0012850.1 Flavonoid F3H low borderline
Rrug01G0023720.1 Flavonoid F3H medium borderline
Rrug01G0027720.1 Flavonoid F3H medium borderline
Rrug01G0030280.1 Flavonoid F3H medium borderline
Rrug01G0042510.1 Flavonoid F3H medium borderline
Rrug01G0042520.1 Flavonoid F3H medium borderline
Rrug01G0042530.1 Flavonoid F3H medium borderline
Rrug01G0042540.1 Flavonoid F3H medium borderline
Rrug01G0045380.1 Flavonoid F3H medium borderline
Rrug02G0000080.1 Flavonoid F3H medium borderline
Rrug02G0000100.1 Flavonoid F3H low borderline
Rrug02G0000790.1 Flavonoid F3H low borderline
Rrug02G0002110.1 Flavonoid F3H low borderline
Rrug02G0002190.1 Flavonoid F3H medium borderline
Rrug02G0005240.1 Flavonoid F3H medium borderline
Rrug02G0014530.1 Flavonoid F3H medium borderline
Rrug02G0015660.1 Flavonoid F3H medium borderline
Rrug02G0015880.1 Flavonoid F3H medium borderline
Rrug02G0015890.1 Flavonoid F3H medium borderline
Rrug02G0015900.1 Flavonoid F3H medium borderline
Rrug02G0015930.1 Flavonoid F3H medium borderline
Rrug02G0023020.1 Flavonoid F3H medium borderline
Rrug02G0023030.1 Flavonoid F3H medium borderline
Rrug02G0023060.1 Flavonoid F3H medium borderline
Rrug02G0023070.1 Flavonoid F3H medium borderline
Rrug02G0023080.1 Flavonoid F3H low borderline
Rrug02G0024530.1 Flavonoid F3H medium borderline
Rrug02G0024550.1 Flavonoid F3H medium borderline
Rrug02G0024570.1 Flavonoid F3H medium borderline
Rrug02G0024600.1 Flavonoid F3H medium borderline
Rrug02G0024620.1 Flavonoid F3H medium borderline
Rrug02G0024660.1 Flavonoid F3H medium borderline
Rrug02G0024680.1 Flavonoid F3H medium borderline
Rrug02G0024770.1 Flavonoid F3H low borderline
Rrug02G0024850.1 Flavonoid F3H medium borderline
Rrug02G0024870.1 Flavonoid F3H medium borderline
Rrug02G0024910.1 Flavonoid F3H medium borderline
Rrug02G0034240.1 Flavonoid F3H medium borderline
Rrug02G0040540.1 Flavonoid F3H medium borderline
Rrug02G0040600.1 Flavonoid F3H medium borderline
Rrug02G0045360.1 Flavonoid F3H medium borderline
Rrug02G0049560.1 Flavonoid F3H medium borderline
Rrug02G0049570.1 Flavonoid F3H medium borderline
Rrug02G0049590.1 Flavonoid F3H medium borderline
Rrug02G0049600.1 Flavonoid F3H medium borderline
Rrug02G0049610.1 Flavonoid F3H medium borderline
Rrug02G0056550.1 Flavonoid F3H medium borderline
Rrug02G0057390.1 Flavonoid F3H medium borderline
Rrug02G0057400.1 Flavonoid F3H medium borderline