PlantSME Plant secondary metabolism enzyme database

Rosa rugosa (rosa_rugosa)

Imported from atlas release summary for Rosa rugosa.

2225
Candidate Protein Records
2079
Pathway-Level Records
4858
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 587 18 UGT (243) View species results
Alkaloid pathway 492 21 7DLGT (134) View species results
Phenylpropanoid pathway 398 11 POD (135) View species results
Flavonoid pathway 293 9 UFGT (234) View species results
Rosmarinic acid pathway 168 7 C4H (73) View species results
Steroid pathway 141 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rrug05G0024150.1 Flavonoid F3H low borderline
Rrug05G0027430.1 Flavonoid F3H low borderline
Rrug05G0034850.1 Flavonoid F3H medium pass
Rrug05G0035710.1 Flavonoid F3H low borderline
Rrug05G0035740.1 Flavonoid F3H low borderline
Rrug05G0042250.1 Flavonoid F3H medium borderline
Rrug05G0047180.1 Flavonoid F3H medium borderline
Rrug05G0047190.1 Flavonoid F3H medium borderline
Rrug05G0049990.1 Flavonoid F3H medium pass
Rrug05G0058490.1 Flavonoid F3H medium borderline
Rrug05G0059950.1 Flavonoid F3H medium borderline
Rrug05G0059980.1 Flavonoid F3H medium borderline
Rrug05G0066830.1 Flavonoid F3H medium borderline
Rrug05G0068660.1 Flavonoid F3H medium borderline
Rrug05G0069340.1 Flavonoid F3H low borderline
Rrug06G0002520.1 Flavonoid F3H medium borderline
Rrug06G0002540.1 Flavonoid F3H medium borderline
Rrug06G0002560.1 Flavonoid F3H medium borderline
Rrug06G0002570.1 Flavonoid F3H medium borderline
Rrug06G0002580.1 Flavonoid F3H medium borderline
Rrug06G0002590.1 Flavonoid F3H medium borderline
Rrug06G0002610.1 Flavonoid F3H medium borderline
Rrug06G0002630.1 Flavonoid F3H medium borderline
Rrug06G0004820.1 Flavonoid F3H medium borderline
Rrug06G0006770.1 Flavonoid F3H low borderline
Rrug06G0008160.1 Flavonoid F3H medium borderline
Rrug06G0011050.1 Flavonoid F3H low borderline
Rrug06G0011310.1 Flavonoid F3H low borderline
Rrug06G0012410.1 Flavonoid F3H low borderline
Rrug06G0013830.1 Flavonoid F3H medium borderline
Rrug06G0020140.1 Flavonoid F3H low borderline
Rrug06G0021500.1 Flavonoid F3H low borderline
Rrug06G0026490.1 Flavonoid F3H medium borderline
Rrug06G0036450.1 Flavonoid F3H medium borderline
Rrug06G0036550.1 Flavonoid F3H medium borderline
Rrug06G0040740.1 Flavonoid F3H low borderline
Rrug06G0040780.1 Flavonoid F3H medium borderline
Rrug06G0044470.1 Flavonoid F3H medium borderline
Rrug06G0052500.1 Flavonoid F3H medium borderline
Rrug06G0052620.1 Flavonoid F3H medium borderline
Rrug06G0056460.1 Flavonoid F3H medium borderline
Rrug07G0008760.1 Flavonoid F3H medium borderline
Rrug07G0009090.1 Flavonoid F3H medium pass
Rrug07G0019250.1 Flavonoid F3H medium borderline
Rrug07G0022320.1 Flavonoid F3H low borderline
Rrug07G0022340.1 Flavonoid F3H low borderline
Rrug07G0022800.1 Flavonoid F3H medium borderline
Rrug07G0023650.1 Flavonoid F3H medium borderline
Rrug07G0023680.1 Flavonoid F3H medium borderline
Rrug07G0023690.1 Flavonoid F3H medium borderline