PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3066
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Sspon.02G0016600-1A-mRNA-1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0016600-2D-mRNA-1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0019050-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Sspon.02G0019050-4D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Sspon.02G0019780-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Sspon.02G0019780-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.02G0019790-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.02G0024960-1A-mRNA-1 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Sspon.02G0024960-2D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Sspon.02G0028700-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Sspon.02G0028700-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Sspon.02G0029860-2B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0030910-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Sspon.02G0030910-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.02G0030910-4D-mRNA-1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.02G0035310-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Sspon.02G0035310-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Sspon.02G0035310-2C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Sspon.02G0035310-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Sspon.02G0036270-1B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0036270-1T-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0036270-2C-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0038700-1B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0043830-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Sspon.02G0043850-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Sspon.02G0048470-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
Sspon.02G0048470-2D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
Sspon.02G0050060-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.02G0050060-2D-mRNA-1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Sspon.02G0050740-1C-mRNA-1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.02G0052260-1C-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Sspon.02G0054830-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00040__sp_Q41745_LPAT_MAIZE
Sspon.02G0056220-1D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.02G0059650-1D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.03G0002910-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Sspon.03G0004040-1A-mRNA-1.cds1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Sspon.03G0005310-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Sspon.03G0005310-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Sspon.03G0005310-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Sspon.03G0007510-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Sspon.03G0007510-2D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Sspon.03G0009030-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Sspon.03G0009030-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Sspon.03G0009030-3C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Sspon.03G0009030-4D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Sspon.03G0010710-1A-mRNA-1.cds1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Sspon.03G0010710-2B-mRNA-1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Sspon.03G0011310-1A-mRNA-1 Terpenoid BAHD medium pass BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
Sspon.03G0011310-2B-mRNA-1.cds1 Terpenoid BAHD low borderline BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Sspon.03G0011320-1A-mRNA-1 Terpenoid BAHD medium pass BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC