PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3066
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
Sspon.02G0007030-1A-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.02G0007030-3D-mRNA-1:cds Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Sspon.02G0007050-1P-mRNA-1.cds1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.02G0007050-2P-mRNA-1.cds1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.02G0024950-1A-mRNA-1 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.02G0024950-2B-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.02G0024950-3D-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.02G0050770-2D-mRNA-1:cds Flavonoid CHS medium pass CHS__00009__sp_Q9AU11_PKS1_RUBID
Sspon.04G0010370-1P-mRNA-1.cds1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.04G0010370-1T-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.04G0012880-1A-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.04G0012880-2D-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.04G0012890-1A-mRNA-1:cds Flavonoid CHS medium pass CHS__00008__sp_Q9AU09_PKS3_RUBID
Sspon.05G0015850-1A-mRNA-1:cds Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Sspon.05G0015850-2B-mRNA-1:cds Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Sspon.05G0015850-3D-mRNA-1:cds Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Sspon.05G0030310-1B-mRNA-1:cds Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Sspon.05G0030310-2C-mRNA-1:cds Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Sspon.06G0010290-2B-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0010290-2P-mRNA-1:cds Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Sspon.06G0010290-3C-mRNA-1:cds Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Sspon.06G0010290-3P-mRNA-1:cds Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Sspon.06G0014780-1A-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0014780-2B-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0014790-2D-mRNA-1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Sspon.06G0014800-3C-mRNA-1 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0014800-4D-mRNA-1:cds Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Sspon.06G0014830-1P-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0014830-1T-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0014830-2B-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015220-1A-mRNA-1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015220-1P-mRNA-1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015220-2P-mRNA-1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015220-3D-mRNA-1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015220-3P-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015220-4P-mRNA-1:cds Flavonoid CHS low borderline CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0015230-1A-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0025230-2D-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0025660-1B-mRNA-1 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0032300-1C-mRNA-1:cds Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Sspon.06G0032330-1C-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0032640-1C-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0034850-1D-mRNA-1:cds Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Sspon.06G0035000-1D-mRNA-1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Sspon.08G0029170-1D-mRNA-1.cds1 Flavonoid CHS low borderline CHS__00004__sp_C6KI62_CHSL1_CANSA