PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3532
Candidate Protein Records
3066
Pathway-Level Records
7784
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Sspon.04G0000510-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Sspon.04G0001240-1A-mRNA-1.cds1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Sspon.04G0001240-2D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Sspon.04G0001680-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.04G0001680-3C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.04G0001680-4D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.04G0004740-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Sspon.04G0004740-2B-mRNA-1 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Sspon.04G0004940-3D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sspon.04G0004970-1A-mRNA-1 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sspon.04G0006410-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Sspon.04G0006410-3C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Sspon.04G0007730-1A-mRNA-1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.04G0007730-2D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.04G0008450-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.04G0008450-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.04G0014970-1A-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Sspon.04G0014970-2B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Sspon.04G0014970-4D-mRNA-1 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Sspon.04G0016690-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Sspon.04G0016690-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Sspon.04G0016690-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Sspon.04G0016690-2P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Sspon.04G0016690-3C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Sspon.04G0016690-3P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Sspon.04G0020460-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Sspon.04G0020460-2B-mRNA-1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Sspon.04G0021260-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Sspon.04G0021260-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Sspon.04G0022010-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Sspon.04G0022010-2P-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Sspon.04G0022040-2C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.04G0022040-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.04G0023280-2C-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
Sspon.04G0023730-1B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Sspon.04G0030510-1C-mRNA-1.cds1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.04G0030510-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.04G0030830-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Sspon.04G0030830-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Sspon.05G0001430-2B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Sspon.05G0001430-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Sspon.05G0002680-1A-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Sspon.05G0002680-2D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Sspon.05G0003040-1A-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Sspon.05G0004680-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Sspon.05G0006850-1A-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Sspon.05G0006850-2B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.05G0006850-3C-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.05G0006850-4D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Sspon.05G0009720-2C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH