PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3532
Candidate Protein Records
3066
Pathway-Level Records
7784
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Sspon.01G0002050-1A-mRNA-1:cds Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Sspon.01G0002050-2B-mRNA-1:cds Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Sspon.01G0002050-3C-mRNA-1:cds Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Sspon.01G0002050-4D-mRNA-1:cds Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Sspon.01G0007930-3D-mRNA-1:cds Alkaloid NMT medium pass NMT__00027__sp_Q10MI4_EZ1_ORYSJ
Sspon.01G0019990-1A-mRNA-1:cds Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Sspon.01G0019990-2B-mRNA-1:cds Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Sspon.01G0019990-3C-mRNA-1:cds Alkaloid NMT medium pass NMT__00023__sp_O82210_ANM12_ARATH
Sspon.01G0019990-4D-mRNA-1:cds Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Sspon.01G0048610-1B-mRNA-1:cds Alkaloid NMT low borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
Sspon.02G0008190-2B-mRNA-1:cds Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Sspon.02G0014840-1A-mRNA-1:cds Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Sspon.02G0014840-1P-mRNA-1:cds Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Sspon.02G0015990-1P-mRNA-1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Sspon.02G0015990-2B-mRNA-1:cds Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Sspon.02G0015990-3C-mRNA-1:cds Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Sspon.02G0015990-4D-mRNA-1:cds Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Sspon.02G0016110-2B-mRNA-1:cds Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Sspon.02G0016110-3D-mRNA-1:cds Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Sspon.02G0018150-1T-mRNA-1:cds Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Sspon.02G0018150-2B-mRNA-1:cds Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Sspon.02G0019870-2B-mRNA-1.cds1 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
Sspon.02G0019870-3D-mRNA-1 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
Sspon.02G0022290-2B-mRNA-1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Sspon.02G0022290-3C-mRNA-1.cds1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Sspon.02G0022480-4D-mRNA-1:cds Alkaloid NMT low borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
Sspon.02G0024390-1A-mRNA-1:cds Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Sspon.02G0037970-1B-mRNA-1:cds Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Sspon.02G0037970-2C-mRNA-1 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Sspon.02G0037970-3D-mRNA-1 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Sspon.02G0039360-1B-mRNA-1:cds Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
Sspon.02G0039360-1P-mRNA-1:cds Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.02G0046550-1C-mRNA-1:cds Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Sspon.02G0046550-2D-mRNA-1:cds Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Sspon.02G0046550-2P-mRNA-1:cds Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Sspon.03G0008370-1A-mRNA-1:cds Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Sspon.03G0008370-3C-mRNA-1 Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Sspon.03G0008370-4D-mRNA-1:cds Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Sspon.03G0008380-1A-mRNA-1 Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Sspon.03G0008380-2C-mRNA-1 Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Sspon.03G0010030-1A-mRNA-1:cds Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Sspon.03G0010030-2B-mRNA-1:cds Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
Sspon.03G0010030-3C-mRNA-1:cds Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Sspon.03G0010030-4D-mRNA-1:cds Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Sspon.03G0022380-1A-mRNA-1:cds Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Sspon.03G0022380-2B-mRNA-1:cds Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Sspon.03G0027800-1B-mRNA-1:cds Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Sspon.03G0027800-2C-mRNA-1:cds Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Sspon.03G0027820-1B-mRNA-1:cds Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Sspon.03G0030150-1B-mRNA-1.cds1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC