PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3066
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Sspon.03G0030150-2D-mRNA-1:cds Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Sspon.03G0030600-1B-mRNA-1:cds Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Sspon.03G0041510-1C-mRNA-1:cds Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Sspon.03G0046130-1D-mRNA-1:cds Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Sspon.04G0000530-1P-mRNA-1:cds Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Sspon.04G0000530-2C-mRNA-1:cds Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Sspon.04G0005130-3C-mRNA-1:cds Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Sspon.04G0005130-4D-mRNA-1:cds Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Sspon.04G0005550-1A-mRNA-1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Sspon.04G0008140-1A-mRNA-1:cds Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Sspon.04G0008440-1P-mRNA-1:cds Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Sspon.04G0008440-2B-mRNA-1:cds Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Sspon.04G0008440-3D-mRNA-1:cds Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Sspon.04G0008460-3D-mRNA-1:cds Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Sspon.04G0010360-1A-mRNA-1:cds Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Sspon.04G0010360-3C-mRNA-1:cds Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Sspon.04G0018630-2B-mRNA-1:cds Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Sspon.04G0018630-3D-mRNA-1:cds Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Sspon.04G0018680-1A-mRNA-1 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
Sspon.04G0018680-1P-mRNA-1.cds1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Sspon.04G0018680-3D-mRNA-1:cds Alkaloid NMT medium borderline NMT__00058__sp_Q9FZN8_TCS1_CAMSI
Sspon.04G0029520-1B-mRNA-1:cds Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Sspon.04G0029520-2D-mRNA-1:cds Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Sspon.04G0032000-2D-mRNA-1.cds1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Sspon.04G0034540-1C-mRNA-1:cds Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Sspon.04G0034540-2D-mRNA-1:cds Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Sspon.05G0011420-1A-mRNA-1:cds Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.05G0011420-1P-mRNA-1 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.05G0011420-2B-mRNA-1:cds Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.05G0011420-2P-mRNA-1:cds Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.05G0011420-3C-mRNA-1 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.05G0011420-4D-mRNA-1:cds Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Sspon.05G0014770-1A-mRNA-1 Alkaloid NMT low borderline NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Sspon.05G0014770-2C-mRNA-1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Sspon.06G0000040-1A-mRNA-1.cds1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Sspon.06G0000040-1P-mRNA-1:cds Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Sspon.06G0000040-3D-mRNA-1.cds1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Sspon.06G0005560-1A-mRNA-1:cds Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Sspon.06G0006710-2D-mRNA-1:cds Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Sspon.06G0009400-1T-mRNA-1:cds Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Sspon.06G0009400-2B-mRNA-1:cds Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Sspon.06G0010980-1A-mRNA-1:cds Alkaloid NMT low borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Sspon.06G0017260-1A-mRNA-1:cds Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Sspon.06G0018880-2C-mRNA-1:cds Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Sspon.06G0020970-1B-mRNA-1:cds Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Sspon.06G0020970-2C-mRNA-1:cds Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Sspon.06G0020970-3D-mRNA-1 Alkaloid NMT low borderline NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Sspon.06G0020980-3D-mRNA-1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Sspon.06G0021500-1B-mRNA-1:cds Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Sspon.06G0021850-1B-mRNA-1:cds Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH