PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3066
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
Sspon.03G0004130-2P-mRNA-1:cds Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
Sspon.03G0004130-3C-mRNA-1:cds Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
Sspon.03G0004130-4D-mRNA-1:cds Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
Sspon.03G0004140-1A-mRNA-1:cds Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
Sspon.03G0004140-2B-mRNA-1:cds Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.03G0006820-1P-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0006820-2P-mRNA-1:cds Terpenoid UGT medium pass UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
Sspon.03G0006820-4D-mRNA-1 Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0007020-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0007030-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0007040-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0007040-2C-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0007050-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0007050-1P-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0008260-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00030__sp_D3UAG3_U88F2_PYRCO
Sspon.03G0008260-2B-mRNA-1:cds Terpenoid UGT medium pass UGT__00030__sp_D3UAG3_U88F2_PYRCO
Sspon.03G0008260-3C-mRNA-1:cds Terpenoid UGT medium pass UGT__00030__sp_D3UAG3_U88F2_PYRCO
Sspon.03G0010440-2B-mRNA-1:cds Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
Sspon.03G0010440-4D-mRNA-1:cds Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
Sspon.03G0015790-3D-mRNA-1:cds Terpenoid UGT low borderline UGT__00075__sp_Q7Y232_U73B4_ARATH
Sspon.03G0019250-3D-mRNA-1:cds Terpenoid UGT low borderline UGT__00102__sp_Q9LZD8_U89A2_ARATH
Sspon.03G0020300-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00015__sp_A0A193AU77_GGT24_PUNGR
Sspon.03G0022010-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
Sspon.03G0025030-1A-mRNA-1 Terpenoid UGT low borderline UGT__00013__sp_A0A172J2D0_UGT2_PUEML
Sspon.03G0025540-1A-mRNA-1.cds1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Sspon.03G0025540-3D-mRNA-1:cds Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
Sspon.03G0025550-1A-mRNA-1:cds Terpenoid UGT low borderline UGT__00075__sp_Q7Y232_U73B4_ARATH
Sspon.03G0036440-1B-mRNA-1 Terpenoid UGT medium pass UGT__00042__sp_K4GHR9_UGT1_BARVU
Sspon.03G0036440-2C-mRNA-1 Terpenoid UGT medium pass UGT__00044__sp_K4GIP0_73C12_BARVU
Sspon.03G0036440-3D-mRNA-1 Terpenoid UGT medium pass UGT__00042__sp_K4GHR9_UGT1_BARVU
Sspon.03G0039730-1C-mRNA-1:cds Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Sspon.03G0039730-2D-mRNA-1:cds Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
Sspon.03G0040810-1P-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.03G0040880-1C-mRNA-1:cds Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
Sspon.04G0003030-1A-mRNA-1:cds Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.04G0003030-4D-mRNA-1:cds Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Sspon.04G0009760-1A-mRNA-1:cds Terpenoid UGT low borderline UGT__00034__sp_F8WLS6_UGT6_CATRO
Sspon.04G0009760-2P-mRNA-1:cds Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.04G0009760-3C-mRNA-1:cds Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.04G0009760-3P-mRNA-1:cds Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.04G0010060-4D-mRNA-1:cds Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.04G0012040-2D-mRNA-1.cds1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Sspon.04G0012650-1T-mRNA-1.cds1 Terpenoid UGT medium pass UGT__00110__sp_Q9ZQ95_U73C6_ARATH
Sspon.04G0012650-3D-mRNA-1:cds Terpenoid UGT low borderline UGT__00043__sp_K4GHS2_73C13_BARVU
Sspon.04G0012660-1A-mRNA-1.cds1 Terpenoid UGT medium pass UGT__00110__sp_Q9ZQ95_U73C6_ARATH
Sspon.04G0026390-1B-mRNA-1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
Sspon.04G0026390-1P-mRNA-1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Sspon.04G0026390-2P-mRNA-1 Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
Sspon.04G0027180-1B-mRNA-1:cds Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
Sspon.04G0029050-2D-mRNA-1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH