PlantSME Plant secondary metabolism enzyme database

Saccharum spontaneum (saccharum_spontaneum)

Imported from atlas release summary for Saccharum spontaneum.

3532
Candidate Protein Records
3066
Pathway-Level Records
7784
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 15 UGT (316) View species results
Alkaloid pathway 662 26 7DLGT (140) View species results
Phenylpropanoid pathway 643 12 POD (306) View species results
Flavonoid pathway 463 11 UFGT (294) View species results
Rosmarinic acid pathway 284 7 C4H (139) View species results
Steroid pathway 167 13 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 560 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
Sspon.08G0015300-1A-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.08G0015300-3D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.08G0015310-1A-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.08G0016320-1A-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
Sspon.08G0016320-2B-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
Sspon.08G0017510-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sspon.08G0017510-1P-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sspon.08G0020390-2C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Sspon.08G0020390-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00046__sp_Q5GKZ7_DAT1A_SOYBN
Sspon.08G0021200-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sspon.08G0021200-3D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sspon.08G0021210-1B-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sspon.08G0021210-2C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sspon.08G0023560-2D-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Sspon.08G0024490-1B-mRNA-1.cds1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Sspon.08G0024490-1T-mRNA-1.cds1 Terpenoid BAHD low borderline BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Sspon.08G0024830-1C-mRNA-1:cds Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sspon.08G0024890-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Sspon.08G0024890-2D-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Sspon.08G0024900-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Sspon.08G0024930-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Sspon.08G0027580-1C-mRNA-1:cds Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sspon.08G0028420-1D-mRNA-1 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Sspon.01G0009570-1P-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0009570-2D-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0010360-1A-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0010360-3C-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0018650-1A-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0018650-1P-mRNA-1:cds Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0018650-1T-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0018650-3C-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0018650-4D-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0022910-1A-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0022910-2B-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0022910-3C-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0022910-4D-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0022930-2B-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0022930-4D-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0025460-1A-mRNA-1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0025460-2B-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0032280-2D-mRNA-1:cds Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0032300-2C-mRNA-1.cds1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0032300-3D-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0040380-3D-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0044830-1B-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0044830-1P-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0044830-2C-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0050160-1B-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
Sspon.01G0054250-1C-mRNA-1:cds Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Sspon.01G0054260-1C-mRNA-1:cds Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO