PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Sspp01G0005710.1 Alkaloid G8O/G8H medium borderline
Sspp01G0005750.1 Alkaloid G8O/G8H medium borderline
Sspp01G0005760.1 Alkaloid G8O/G8H medium borderline
Sspp01G0011730.1 Alkaloid G8O/G8H low borderline
Sspp01G0015530.1 Alkaloid G8O/G8H medium borderline
Sspp01G0018760.1 Alkaloid G8O/G8H medium borderline
Sspp01G0027890.1 Alkaloid G8O/G8H medium borderline
Sspp01G0035270.1 Alkaloid G8O/G8H medium pass
Sspp02G0001890.1 Alkaloid G8O/G8H low borderline
Sspp02G0002720.1 Alkaloid G8O/G8H medium borderline
Sspp02G0003110.1 Alkaloid G8O/G8H low borderline
Sspp02G0005880.1 Alkaloid G8O/G8H medium borderline
Sspp02G0009920.1 Alkaloid G8O/G8H medium borderline
Sspp02G0013960.1 Alkaloid G8O/G8H medium borderline
Sspp02G0018770.1 Alkaloid G8O/G8H medium borderline
Sspp02G0025290.1 Alkaloid G8O/G8H medium borderline
Sspp02G0030260.1 Alkaloid G8O/G8H medium pass
Sspp02G0030460.1 Alkaloid G8O/G8H medium borderline
Sspp03G0000670.1 Alkaloid G8O/G8H medium pass
Sspp03G0024810.1 Alkaloid G8O/G8H low borderline
Sspp03G0031250.1 Alkaloid G8O/G8H medium borderline
Sspp05G0006410.1 Alkaloid G8O/G8H medium borderline
Sspp05G0008020.1 Alkaloid G8O/G8H medium borderline
Sspp05G0008340.1 Alkaloid G8O/G8H medium borderline
Sspp05G0011400.1 Alkaloid G8O/G8H medium borderline
Sspp06G0002120.1 Alkaloid G8O/G8H low borderline
Sspp07G0002170.1 Alkaloid G8O/G8H medium borderline
Sspp07G0003190.1 Alkaloid G8O/G8H low borderline
Sspp07G0009740.1 Alkaloid G8O/G8H medium borderline
Sspp07G0011280.1 Alkaloid G8O/G8H medium borderline
Sspp07G0011340.1 Alkaloid G8O/G8H medium borderline
Sspp07G0014210.1 Alkaloid G8O/G8H medium borderline
Sspp07G0014220.1 Alkaloid G8O/G8H medium borderline
Sspp08G0000820.1 Alkaloid G8O/G8H medium borderline
Sspp08G0009720.1 Alkaloid G8O/G8H medium borderline
Sspp08G0009770.1 Alkaloid G8O/G8H medium borderline
Sspp09G0019210.1 Alkaloid G8O/G8H low borderline
Sspp10G0009460.1 Alkaloid G8O/G8H medium borderline
Sspp10G0012060.1 Alkaloid G8O/G8H medium borderline
Sspp10G0012070.1 Alkaloid G8O/G8H medium borderline
Sspp10G0014310.1 Alkaloid G8O/G8H medium borderline
Sspp10G0014320.1 Alkaloid G8O/G8H medium borderline
SsppSh_003E120000230.1 Alkaloid G8O/G8H medium borderline