PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Sspp01G0011390.1 Flavonoid 4CL medium pass
Sspp01G0015110.1 Flavonoid 4CL medium pass
Sspp01G0021470.1 Flavonoid 4CL low borderline
Sspp01G0031720.1 Flavonoid 4CL medium pass
Sspp01G0031730.1 Flavonoid 4CL medium pass
Sspp01G0041030.1 Flavonoid 4CL medium pass
Sspp01G0042690.1 Flavonoid 4CL medium pass
Sspp01G0042710.1 Flavonoid 4CL medium pass
Sspp01G0042730.1 Flavonoid 4CL medium pass
Sspp01G0042870.1 Flavonoid 4CL medium pass
Sspp02G0000850.1 Flavonoid 4CL medium pass
Sspp03G0016700.1 Flavonoid 4CL low borderline
Sspp03G0017840.1 Flavonoid 4CL low borderline
Sspp03G0028940.1 Flavonoid 4CL medium pass
Sspp04G0004460.1 Flavonoid 4CL medium pass
Sspp04G0011070.1 Flavonoid 4CL low borderline
Sspp04G0019970.1 Flavonoid 4CL medium pass
Sspp05G0001110.1 Flavonoid 4CL low borderline
Sspp05G0003160.1 Flavonoid 4CL low borderline
Sspp05G0007910.1 Flavonoid 4CL low borderline
Sspp06G0003370.1 Flavonoid 4CL low borderline
Sspp06G0019380.1 Flavonoid 4CL medium pass
Sspp06G0020180.1 Flavonoid 4CL medium pass
Sspp07G0010620.1 Flavonoid 4CL medium pass
Sspp08G0000780.1 Flavonoid 4CL low borderline
Sspp08G0003890.1 Flavonoid 4CL low borderline
Sspp09G0002710.1 Flavonoid 4CL low borderline
Sspp10G0014730.1 Flavonoid 4CL low borderline
Sspp10G0015050.1 Flavonoid 4CL medium pass
SsppSh_225F120005560.1 Flavonoid 4CL medium pass
SsppSh_225F120005570.1 Flavonoid 4CL medium pass
SsppSh_250F110008810.1 Flavonoid 4CL low borderline
Sspp01G0002710.1 Flavonoid ANR medium borderline
Sspp01G0016210.1 Flavonoid ANR high pass
Sspp01G0021740.1 Flavonoid ANR low borderline
Sspp01G0026320.1 Flavonoid ANR low borderline
Sspp03G0015900.1 Flavonoid ANR medium borderline
Sspp03G0025270.1 Flavonoid ANR medium borderline
Sspp03G0025280.1 Flavonoid ANR medium borderline
Sspp06G0016420.1 Flavonoid ANR medium borderline
Sspp07G0005430.1 Flavonoid ANR medium borderline
Sspp07G0011780.1 Flavonoid ANR medium borderline
Sspp09G0019280.1 Flavonoid ANR low borderline
Sspp10G0006030.1 Flavonoid ANR medium borderline
Sspp10G0006040.1 Flavonoid ANR medium borderline
Sspp10G0014760.1 Flavonoid ANR medium borderline
Sspp10G0016240.1 Flavonoid ANR medium borderline
SsppSh_203E130002210.1 Flavonoid ANR high pass
SsppSh_245L090008070.1 Flavonoid ANR medium borderline
Sspp02G0014360.1 Flavonoid ANS/LDOX medium borderline