PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Sspp05G0003830.1 Flavonoid ANS/LDOX low borderline
Sspp05G0003850.1 Flavonoid ANS/LDOX low borderline
Sspp07G0009140.1 Flavonoid ANS/LDOX low borderline
Sspp08G0007080.1 Flavonoid ANS/LDOX medium borderline
Sspp08G0007090.1 Flavonoid ANS/LDOX medium borderline
Sspp08G0007100.1 Flavonoid ANS/LDOX medium pass
Sspp10G0001640.1 Flavonoid ANS/LDOX medium pass
Sspp10G0001660.1 Flavonoid ANS/LDOX medium borderline
Sspp10G0005510.1 Flavonoid ANS/LDOX low borderline
Sspp01G0035270.1 Flavonoid C4H low borderline
Sspp02G0001890.1 Flavonoid C4H low borderline
Sspp02G0029570.1 Flavonoid C4H medium borderline
Sspp03G0018640.1 Flavonoid C4H medium borderline
Sspp03G0018670.1 Flavonoid C4H low borderline
Sspp03G0024810.1 Flavonoid C4H medium pass
Sspp05G0008340.1 Flavonoid C4H medium borderline
Sspp06G0003430.1 Flavonoid C4H medium borderline
Sspp01G0002450.1 Flavonoid CHI medium pass
Sspp08G0002490.1 Flavonoid CHI medium pass
Sspp01G0017210.1 Flavonoid CHS medium pass
Sspp02G0007650.1 Flavonoid CHS medium pass
Sspp02G0022160.1 Flavonoid CHS medium pass
Sspp02G0022170.1 Flavonoid CHS medium pass
Sspp02G0022180.1 Flavonoid CHS medium pass
Sspp02G0022230.1 Flavonoid CHS medium pass
Sspp02G0022270.1 Flavonoid CHS medium pass
Sspp02G0022300.1 Flavonoid CHS medium pass
Sspp05G0006220.1 Flavonoid CHS medium pass
Sspp05G0007340.1 Flavonoid CHS medium pass
Sspp05G0007350.1 Flavonoid CHS medium pass
Sspp05G0007360.1 Flavonoid CHS medium pass
Sspp05G0007370.1 Flavonoid CHS medium pass
Sspp07G0005040.1 Flavonoid CHS medium pass
Sspp07G0005050.1 Flavonoid CHS medium pass
Sspp08G0002920.1 Flavonoid CHS medium pass
Sspp01G0002690.1 Flavonoid DFR medium pass
Sspp01G0002700.1 Flavonoid DFR low borderline
Sspp01G0033140.1 Flavonoid DFR low borderline
Sspp02G0016630.1 Flavonoid DFR medium borderline
Sspp03G0007970.1 Flavonoid DFR medium borderline
Sspp03G0025290.1 Flavonoid DFR medium borderline
Sspp03G0025300.1 Flavonoid DFR medium pass
Sspp04G0004820.1 Flavonoid DFR medium borderline
Sspp04G0004830.1 Flavonoid DFR medium pass
Sspp04G0026040.1 Flavonoid DFR medium borderline
Sspp04G0026050.1 Flavonoid DFR medium borderline
Sspp04G0026060.1 Flavonoid DFR medium borderline
Sspp04G0026070.1 Flavonoid DFR medium borderline
Sspp04G0026080.1 Flavonoid DFR medium borderline
Sspp07G0016340.1 Flavonoid DFR medium borderline