Saccharum spp.R570 (saccharum_spp_r570)
Imported from atlas release summary for Saccharum spp.R570.
1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1344
Candidate Genes
C4H
7.21%
C3'H/CYP98A
6.76%
BAHD
4.44%
UGT
4.32%
CYP76
4.29%
POD
4.26%
IFS
4.17%
7DLGT
3.84%
Other Families
60.72%
More Families (94)
T3O
126
3.75%
UFGT
126
3.75%
4CL
96
2.86%
BR6OX2/CYP85A2
94
2.8%
DWF4/CYP90B1
87
2.59%
F3'H/CYP75B
80
2.38%
STR
73
2.17%
F3H
68
2.03%
CYP71
65
1.94%
H6H
49
1.46%
TRI/TRII
44
1.31%
G8O/G8H
43
1.28%
NMT
43
1.28%
LAC
41
1.22%
SMT1/SMT2/SMT3
40
1.19%
T16H
37
1.1%
CAD
36
1.07%
PYKS
32
0.95%
FNS
32
0.95%
CCR
32
0.95%
TPS
32
0.95%
CAS
31
0.92%
PAL
30
0.89%
SLS
29
0.86%
CODM/T6ODM
29
0.86%
SGD
27
0.8%
GES
27
0.8%
COMT
27
0.8%
CYP90D1
25
0.74%
16OMT
24
0.71%
RAS
24
0.71%
CYP51G1
24
0.71%
F5H/CYP84A
23
0.68%
IO
22
0.66%
DFR
22
0.66%
F3'5'H/CYP75A
22
0.66%
CSE
22
0.66%
HCT
22
0.66%
IFR
18
0.54%
PMT
17
0.51%
7DLH
17
0.51%
ANR
17
0.51%
CHS
16
0.48%
BR6OX1/CYP85A1
16
0.48%
NCS
15
0.45%
COR
13
0.39%
GS
13
0.39%
8HGO
10
0.3%
MPO
10
0.3%
ANS/LDOX
10
0.3%
CNMT
9
0.27%
CPD/CYP90A1
9
0.27%
CYP719
8
0.24%
FPPS
8
0.24%
HPPR
7
0.21%
TAT
7
0.21%
ROT3/CYP90C1
7
0.21%
CYP80B1
6
0.18%
TYDC_DDC
6
0.18%
XMT_MXMT_DXMT
6
0.18%
GGPPS
6
0.18%
ISY
5
0.15%
CPI1
5
0.15%
AACT
5
0.15%
ODC
4
0.12%
TDC
4
0.12%
HMGS
4
0.12%
BBE
3
0.09%
LAMT
3
0.09%
CPR
3
0.09%
SQS/FDFT1
3
0.09%
SMO1/SMO2
3
0.09%
DET2
3
0.09%
DWF7
3
0.09%
MVK
3
0.09%
IDI
3
0.09%
6OMT_4OMT_SOMT
2
0.06%
CHI
2
0.06%
FLS
2
0.06%
HYD1
2
0.06%
DWF5
2
0.06%
FK
2
0.06%
HDR/IspH
2
0.06%
MVD
2
0.06%
MCT/IspD
2
0.06%
HMGR
2
0.06%
CYP80F1
1
0.03%
ADC
1
0.03%
SQE
1
0.03%
DWF1
1
0.03%
PMK
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 377 | 16 | UGT (135) | View species results |
| Alkaloid pathway | 294 | 23 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 266 | 11 | POD (131) | View species results |
| Flavonoid pathway | 197 | 12 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 140 | 7 | C4H (84) | View species results |
| Steroid pathway | 70 | 13 | SMT1/SMT2/SMT3 (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1494 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 195 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Sspp01G0001350.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Sspp01G0003400.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp01G0003420.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp01G0003470.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp01G0003480.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp01G0005990.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Sspp01G0006000.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Sspp01G0006010.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Sspp01G0006020.1 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Sspp01G0006030.1 | Terpenoid | UGT | low | borderline | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Sspp01G0006040.1 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Sspp01G0006050.1 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Sspp01G0006060.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Sspp01G0006070.1 | Terpenoid | UGT | low | borderline | UGT__00098__sp_Q9LTH2_U76E2_ARATH |
| Sspp01G0006970.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Sspp01G0013260.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Sspp01G0024850.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Sspp01G0024860.1 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Sspp01G0024900.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Sspp01G0024910.1 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Sspp01G0024930.1 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Sspp01G0024940.1 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Sspp01G0037590.1 | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| Sspp01G0041570.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| Sspp01G0041580.1 | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| Sspp01G0042530.1 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Sspp02G0002430.1 | Terpenoid | UGT | medium | pass | UGT__00020__sp_A3BK75_UGT83_ORYSJ |
| Sspp02G0004540.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0004560.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0004580.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0004590.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0005570.1 | Terpenoid | UGT | medium | pass | UGT__00085__sp_Q9FIA0_U76C2_ARATH |
| Sspp02G0005580.1 | Terpenoid | UGT | medium | pass | UGT__00085__sp_Q9FIA0_U76C2_ARATH |
| Sspp02G0005590.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Sspp02G0005630.1 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Sspp02G0006520.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0006730.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0007090.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Sspp02G0007100.1 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Sspp02G0010630.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Sspp02G0011820.1 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| Sspp02G0011830.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Sspp02G0013990.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Sspp02G0017910.1 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Sspp02G0017930.1 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Sspp02G0018390.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Sspp02G0021600.1 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Sspp02G0021610.1 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| Sspp02G0021630.1 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Sspp02G0022200.1 | Terpenoid | UGT | medium | pass | UGT__00020__sp_A3BK75_UGT83_ORYSJ |