Saccharum spp.R570 (saccharum_spp_r570)
Imported from atlas release summary for Saccharum spp.R570.
1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1344
Candidate Genes
C4H
7.21%
C3'H/CYP98A
6.76%
BAHD
4.44%
UGT
4.32%
CYP76
4.29%
POD
4.26%
IFS
4.17%
7DLGT
3.84%
Other Families
60.72%
More Families (94)
T3O
126
3.75%
UFGT
126
3.75%
4CL
96
2.86%
BR6OX2/CYP85A2
94
2.8%
DWF4/CYP90B1
87
2.59%
F3'H/CYP75B
80
2.38%
STR
73
2.17%
F3H
68
2.03%
CYP71
65
1.94%
H6H
49
1.46%
TRI/TRII
44
1.31%
G8O/G8H
43
1.28%
NMT
43
1.28%
LAC
41
1.22%
SMT1/SMT2/SMT3
40
1.19%
T16H
37
1.1%
CAD
36
1.07%
PYKS
32
0.95%
FNS
32
0.95%
CCR
32
0.95%
TPS
32
0.95%
CAS
31
0.92%
PAL
30
0.89%
SLS
29
0.86%
CODM/T6ODM
29
0.86%
SGD
27
0.8%
GES
27
0.8%
COMT
27
0.8%
CYP90D1
25
0.74%
16OMT
24
0.71%
RAS
24
0.71%
CYP51G1
24
0.71%
F5H/CYP84A
23
0.68%
IO
22
0.66%
DFR
22
0.66%
F3'5'H/CYP75A
22
0.66%
CSE
22
0.66%
HCT
22
0.66%
IFR
18
0.54%
PMT
17
0.51%
7DLH
17
0.51%
ANR
17
0.51%
CHS
16
0.48%
BR6OX1/CYP85A1
16
0.48%
NCS
15
0.45%
COR
13
0.39%
GS
13
0.39%
8HGO
10
0.3%
MPO
10
0.3%
ANS/LDOX
10
0.3%
CNMT
9
0.27%
CPD/CYP90A1
9
0.27%
CYP719
8
0.24%
FPPS
8
0.24%
HPPR
7
0.21%
TAT
7
0.21%
ROT3/CYP90C1
7
0.21%
CYP80B1
6
0.18%
TYDC_DDC
6
0.18%
XMT_MXMT_DXMT
6
0.18%
GGPPS
6
0.18%
ISY
5
0.15%
CPI1
5
0.15%
AACT
5
0.15%
ODC
4
0.12%
TDC
4
0.12%
HMGS
4
0.12%
BBE
3
0.09%
LAMT
3
0.09%
CPR
3
0.09%
SQS/FDFT1
3
0.09%
SMO1/SMO2
3
0.09%
DET2
3
0.09%
DWF7
3
0.09%
MVK
3
0.09%
IDI
3
0.09%
6OMT_4OMT_SOMT
2
0.06%
CHI
2
0.06%
FLS
2
0.06%
HYD1
2
0.06%
DWF5
2
0.06%
FK
2
0.06%
HDR/IspH
2
0.06%
MVD
2
0.06%
MCT/IspD
2
0.06%
HMGR
2
0.06%
CYP80F1
1
0.03%
ADC
1
0.03%
SQE
1
0.03%
DWF1
1
0.03%
PMK
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 377 | 16 | UGT (135) | View species results |
| Alkaloid pathway | 294 | 23 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 266 | 11 | POD (131) | View species results |
| Flavonoid pathway | 197 | 12 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 140 | 7 | C4H (84) | View species results |
| Steroid pathway | 70 | 13 | SMT1/SMT2/SMT3 (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1494 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 195 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Sspp03G0010100.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Sspp03G0010310.1 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| Sspp03G0010520.1 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Sspp03G0010930.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Sspp03G0013220.1 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| Sspp03G0013230.1 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| Sspp03G0015320.1 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Sspp03G0015820.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| Sspp03G0015830.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| Sspp03G0016480.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| Sspp03G0017810.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Sspp03G0019540.1 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Sspp03G0023160.1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Sspp03G0025930.1 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| Sspp03G0026660.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Sspp03G0030740.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Sspp04G0000530.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Sspp04G0014620.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Sspp04G0015720.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Sspp04G0018880.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Sspp04G0019420.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Sspp04G0020810.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Sspp04G0020820.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Sspp04G0021360.1 | Terpenoid | BAHD | medium | pass | BAHD__00040__sp_Q41745_LPAT_MAIZE |
| Sspp04G0024970.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Sspp04G0025600.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Sspp04G0026610.1 | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Sspp05G0001500.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Sspp05G0002430.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Sspp05G0006050.1 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Sspp05G0007670.1 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| Sspp05G0007680.1 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| Sspp06G0001360.1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| Sspp06G0001380.1 | Terpenoid | BAHD | medium | pass | BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC |
| Sspp06G0002110.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Sspp06G0005450.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Sspp06G0010090.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Sspp06G0014940.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Sspp06G0014950.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Sspp06G0014970.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Sspp06G0015400.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Sspp06G0019350.1 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Sspp06G0020860.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Sspp06G0020870.1 | Terpenoid | BAHD | low | borderline | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Sspp07G0000180.1 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| Sspp07G0000890.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Sspp07G0002630.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Sspp07G0005060.1 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Sspp07G0010490.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Sspp07G0010500.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |