PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Sspp05G0001870.1 Alkaloid 7DLGT low borderline
Sspp05G0003720.1 Alkaloid 7DLGT low borderline
Sspp05G0003730.1 Alkaloid 7DLGT medium pass
Sspp05G0003750.1 Alkaloid 7DLGT high pass
Sspp05G0005500.1 Alkaloid 7DLGT low borderline
Sspp05G0009870.1 Alkaloid 7DLGT low borderline
Sspp05G0009890.1 Alkaloid 7DLGT low borderline
Sspp05G0010250.1 Alkaloid 7DLGT low borderline
Sspp06G0002420.1 Alkaloid 7DLGT medium pass
Sspp06G0005920.1 Alkaloid 7DLGT medium pass
Sspp06G0007910.1 Alkaloid 7DLGT low borderline
Sspp06G0008420.1 Alkaloid 7DLGT low borderline
Sspp06G0009140.1 Alkaloid 7DLGT medium pass
Sspp06G0009380.1 Alkaloid 7DLGT medium pass
Sspp06G0009880.1 Alkaloid 7DLGT medium pass
Sspp06G0009890.1 Alkaloid 7DLGT low borderline
Sspp06G0009900.1 Alkaloid 7DLGT low borderline
Sspp06G0010040.1 Alkaloid 7DLGT medium pass
Sspp06G0012030.1 Alkaloid 7DLGT medium pass
Sspp06G0012040.1 Alkaloid 7DLGT medium pass
Sspp06G0012060.1 Alkaloid 7DLGT medium pass
Sspp06G0012070.1 Alkaloid 7DLGT medium pass
Sspp06G0012080.1 Alkaloid 7DLGT low borderline
Sspp06G0012090.1 Alkaloid 7DLGT medium pass
Sspp06G0017630.1 Alkaloid 7DLGT low borderline
Sspp06G0017710.1 Alkaloid 7DLGT low borderline
Sspp06G0018270.1 Alkaloid 7DLGT low borderline
Sspp07G0004190.1 Alkaloid 7DLGT high pass
Sspp07G0004200.1 Alkaloid 7DLGT medium pass
Sspp07G0004970.1 Alkaloid 7DLGT high pass
Sspp07G0009890.1 Alkaloid 7DLGT medium pass
Sspp07G0017990.1 Alkaloid 7DLGT low borderline
Sspp08G0007630.1 Alkaloid 7DLGT medium pass
Sspp08G0010120.1 Alkaloid 7DLGT medium pass
Sspp08G0010130.1 Alkaloid 7DLGT medium pass
Sspp09G0002870.1 Alkaloid 7DLGT low borderline
Sspp09G0005680.1 Alkaloid 7DLGT low borderline
Sspp09G0005690.1 Alkaloid 7DLGT medium pass
Sspp09G0005730.1 Alkaloid 7DLGT low borderline
Sspp09G0010250.1 Alkaloid 7DLGT low borderline
Sspp09G0011750.1 Alkaloid 7DLGT low borderline
Sspp09G0014480.1 Alkaloid 7DLGT low borderline
Sspp09G0016090.1 Alkaloid 7DLGT medium pass
Sspp09G0016100.1 Alkaloid 7DLGT medium pass
Sspp09G0016110.1 Alkaloid 7DLGT medium pass
Sspp09G0016120.1 Alkaloid 7DLGT medium pass
Sspp09G0016130.1 Alkaloid 7DLGT medium pass
Sspp09G0016720.1 Alkaloid 7DLGT low borderline
Sspp10G0001250.1 Alkaloid 7DLGT medium pass
Sspp10G0006230.1 Alkaloid 7DLGT low borderline