Saccharum spp.R570 (saccharum_spp_r570)
Imported from atlas release summary for Saccharum spp.R570.
1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1344
Candidate Genes
C4H
7.21%
C3'H/CYP98A
6.76%
BAHD
4.44%
UGT
4.32%
CYP76
4.29%
POD
4.26%
IFS
4.17%
7DLGT
3.84%
Other Families
60.72%
More Families (94)
T3O
126
3.75%
UFGT
126
3.75%
4CL
96
2.86%
BR6OX2/CYP85A2
94
2.8%
DWF4/CYP90B1
87
2.59%
F3'H/CYP75B
80
2.38%
STR
73
2.17%
F3H
68
2.03%
CYP71
65
1.94%
H6H
49
1.46%
TRI/TRII
44
1.31%
G8O/G8H
43
1.28%
NMT
43
1.28%
LAC
41
1.22%
SMT1/SMT2/SMT3
40
1.19%
T16H
37
1.1%
CAD
36
1.07%
PYKS
32
0.95%
FNS
32
0.95%
CCR
32
0.95%
TPS
32
0.95%
CAS
31
0.92%
PAL
30
0.89%
SLS
29
0.86%
CODM/T6ODM
29
0.86%
SGD
27
0.8%
GES
27
0.8%
COMT
27
0.8%
CYP90D1
25
0.74%
16OMT
24
0.71%
RAS
24
0.71%
CYP51G1
24
0.71%
F5H/CYP84A
23
0.68%
IO
22
0.66%
DFR
22
0.66%
F3'5'H/CYP75A
22
0.66%
CSE
22
0.66%
HCT
22
0.66%
IFR
18
0.54%
PMT
17
0.51%
7DLH
17
0.51%
ANR
17
0.51%
CHS
16
0.48%
BR6OX1/CYP85A1
16
0.48%
NCS
15
0.45%
COR
13
0.39%
GS
13
0.39%
8HGO
10
0.3%
MPO
10
0.3%
ANS/LDOX
10
0.3%
CNMT
9
0.27%
CPD/CYP90A1
9
0.27%
CYP719
8
0.24%
FPPS
8
0.24%
HPPR
7
0.21%
TAT
7
0.21%
ROT3/CYP90C1
7
0.21%
CYP80B1
6
0.18%
TYDC_DDC
6
0.18%
XMT_MXMT_DXMT
6
0.18%
GGPPS
6
0.18%
ISY
5
0.15%
CPI1
5
0.15%
AACT
5
0.15%
ODC
4
0.12%
TDC
4
0.12%
HMGS
4
0.12%
BBE
3
0.09%
LAMT
3
0.09%
CPR
3
0.09%
SQS/FDFT1
3
0.09%
SMO1/SMO2
3
0.09%
DET2
3
0.09%
DWF7
3
0.09%
MVK
3
0.09%
IDI
3
0.09%
6OMT_4OMT_SOMT
2
0.06%
CHI
2
0.06%
FLS
2
0.06%
HYD1
2
0.06%
DWF5
2
0.06%
FK
2
0.06%
HDR/IspH
2
0.06%
MVD
2
0.06%
MCT/IspD
2
0.06%
HMGR
2
0.06%
CYP80F1
1
0.03%
ADC
1
0.03%
SQE
1
0.03%
DWF1
1
0.03%
PMK
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 377 | 16 | UGT (135) | View species results |
| Alkaloid pathway | 294 | 23 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 266 | 11 | POD (131) | View species results |
| Flavonoid pathway | 197 | 12 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 140 | 7 | C4H (84) | View species results |
| Steroid pathway | 70 | 13 | SMT1/SMT2/SMT3 (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1494 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 195 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Sspp07G0013250.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp08G0003220.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp08G0004400.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp09G0000180.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp10G0001970.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp10G0007700.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp10G0009400.1 | Terpenoid | CYP71 | low | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp10G0009460.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp10G0014260.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp10G0014270.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp10G0017450.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp10G0017460.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp10G0017470.1 | Terpenoid | CYP71 | low | borderline | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Sspp10G0017480.1 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| SsppSh_232F040006740.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| SsppSh_232F040006790.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| SsppSh_242B070007750.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| SsppSh_242B070007770.1 | Terpenoid | CYP71 | low | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| SsppSh_242B070007780.1 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| Sspp01G0000880.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Sspp01G0001470.1 | Terpenoid | CYP76 | low | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Sspp01G0005710.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Sspp01G0005740.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Sspp01G0005750.1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Sspp01G0005770.1 | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| Sspp01G0005780.1 | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| Sspp01G0005800.1 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Sspp01G0005810.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Sspp01G0005820.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Sspp01G0010980.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Sspp01G0014270.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Sspp01G0014970.1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Sspp01G0015030.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Sspp01G0015520.1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Sspp01G0015530.1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Sspp01G0015590.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Sspp01G0015600.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Sspp01G0018760.1 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Sspp01G0024410.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Sspp01G0025890.1 | Terpenoid | CYP76 | medium | pass | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| Sspp01G0026720.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT |
| Sspp01G0027850.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Sspp01G0027870.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Sspp01G0027890.1 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Sspp01G0028300.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Sspp01G0028310.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Sspp01G0028340.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Sspp01G0028350.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Sspp01G0028420.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Sspp01G0028430.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |