PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1512
Candidate Protein Records
1344
Pathway-Level Records
3358
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sspp07G0007430.1 Rosmarinic Acid CPR medium pass
Sspp07G0014640.1 Rosmarinic Acid CPR low borderline
Sspp02G0002160.1 Rosmarinic Acid HPPR medium pass
Sspp06G0000290.1 Rosmarinic Acid HPPR medium pass
Sspp06G0000300.1 Rosmarinic Acid HPPR medium pass
Sspp06G0000320.1 Rosmarinic Acid HPPR medium pass
SsppSh_201J050001900.1 Rosmarinic Acid HPPR medium pass
SsppSh_201J050001910.1 Rosmarinic Acid HPPR medium pass
SsppSh_201J050001940.1 Rosmarinic Acid HPPR medium pass
Sspp04G0015380.1 Rosmarinic Acid PAL high pass
Sspp04G0015390.1 Rosmarinic Acid PAL high pass
Sspp04G0015400.1 Rosmarinic Acid PAL high pass
Sspp04G0015410.1 Rosmarinic Acid PAL high pass
Sspp06G0009640.1 Rosmarinic Acid PAL high pass
Sspp06G0009650.1 Rosmarinic Acid PAL high pass
SsppSh_058B010001030.1 Rosmarinic Acid PAL high pass
SsppSh_058B010001040.1 Rosmarinic Acid PAL high pass
SsppSh_058B010001050.1 Rosmarinic Acid PAL high pass
SsppSh_058B010001060.1 Rosmarinic Acid PAL high pass
Sspp01G0010790.1 Rosmarinic Acid RAS medium pass
Sspp01G0021050.1 Rosmarinic Acid RAS low borderline
Sspp02G0013170.1 Rosmarinic Acid RAS medium pass
Sspp02G0013180.1 Rosmarinic Acid RAS medium pass
Sspp02G0013190.1 Rosmarinic Acid RAS medium pass
Sspp02G0019710.1 Rosmarinic Acid RAS medium pass
Sspp03G0003210.1 Rosmarinic Acid RAS low borderline
Sspp03G0004720.1 Rosmarinic Acid RAS medium pass
Sspp04G0001060.1 Rosmarinic Acid RAS low borderline
Sspp04G0014620.1 Rosmarinic Acid RAS medium pass
Sspp04G0027880.1 Rosmarinic Acid RAS low borderline
Sspp06G0001360.1 Rosmarinic Acid RAS low borderline
Sspp06G0001380.1 Rosmarinic Acid RAS medium pass
Sspp06G0014970.1 Rosmarinic Acid RAS low borderline
Sspp07G0010490.1 Rosmarinic Acid RAS medium pass
Sspp07G0010500.1 Rosmarinic Acid RAS medium pass
Sspp08G0009780.1 Rosmarinic Acid RAS medium pass
Sspp09G0003100.1 Rosmarinic Acid RAS low borderline
Sspp09G0005910.1 Rosmarinic Acid RAS low borderline
Sspp09G0015240.1 Rosmarinic Acid RAS low borderline
Sspp10G0003900.1 Rosmarinic Acid RAS low borderline
Sspp10G0012600.1 Rosmarinic Acid RAS low borderline
Sspp10G0012710.1 Rosmarinic Acid RAS low borderline
SsppSh_236C090007110.1 Rosmarinic Acid RAS low borderline
Sspp02G0002770.1 Rosmarinic Acid TAT medium pass
Sspp02G0002790.1 Rosmarinic Acid TAT medium pass
Sspp02G0002800.1 Rosmarinic Acid TAT medium pass
Sspp03G0003440.1 Rosmarinic Acid TAT medium pass
Sspp03G0013290.1 Rosmarinic Acid TAT medium pass
Sspp05G0007770.1 Rosmarinic Acid TAT medium pass
Sspp05G0007780.1 Rosmarinic Acid TAT medium pass