PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Sspp05G0010880.1 Flavonoid FNS medium borderline
Sspp06G0002120.1 Flavonoid FNS medium borderline
Sspp07G0001160.1 Flavonoid FNS medium borderline
Sspp07G0003200.1 Flavonoid FNS medium borderline
Sspp07G0009180.1 Flavonoid FNS medium borderline
Sspp08G0008740.1 Flavonoid FNS medium borderline
Sspp09G0015370.1 Flavonoid FNS medium borderline
Sspp10G0014310.1 Flavonoid FNS medium borderline
Sspp10G0014320.1 Flavonoid FNS medium borderline
SsppSh_242B070007760.1 Flavonoid FNS medium borderline
SsppSh_242B070007770.1 Flavonoid FNS medium borderline
Sspp01G0002210.1 Flavonoid IFR low borderline
Sspp01G0019530.1 Flavonoid IFR low borderline
Sspp01G0028670.1 Flavonoid IFR low borderline
Sspp01G0029000.1 Flavonoid IFR medium pass
Sspp02G0000040.1 Flavonoid IFR low borderline
Sspp03G0029290.1 Flavonoid IFR high pass
Sspp03G0029320.1 Flavonoid IFR medium pass
Sspp04G0002490.1 Flavonoid IFR low borderline
Sspp04G0019430.1 Flavonoid IFR high pass
Sspp04G0026370.1 Flavonoid IFR low borderline
Sspp06G0003300.1 Flavonoid IFR low borderline
Sspp07G0013180.1 Flavonoid IFR low borderline
Sspp07G0013190.1 Flavonoid IFR low borderline
Sspp07G0013570.1 Flavonoid IFR medium pass
Sspp08G0006850.1 Flavonoid IFR high pass
Sspp08G0006860.1 Flavonoid IFR high pass
Sspp08G0006870.1 Flavonoid IFR medium pass
Sspp09G0001290.1 Flavonoid IFR low borderline
Sspp01G0000880.1 Flavonoid IFS medium borderline
Sspp01G0000890.1 Flavonoid IFS medium borderline
Sspp01G0005720.1 Flavonoid IFS low borderline
Sspp01G0005740.1 Flavonoid IFS medium borderline
Sspp01G0005810.1 Flavonoid IFS medium borderline
Sspp01G0005820.1 Flavonoid IFS medium borderline
Sspp01G0011730.1 Flavonoid IFS low borderline
Sspp01G0011780.1 Flavonoid IFS low borderline
Sspp01G0014270.1 Flavonoid IFS medium borderline
Sspp01G0014970.1 Flavonoid IFS medium borderline
Sspp01G0017060.1 Flavonoid IFS low borderline
Sspp01G0018760.1 Flavonoid IFS low borderline
Sspp01G0018770.1 Flavonoid IFS medium borderline
Sspp01G0020390.1 Flavonoid IFS low borderline
Sspp01G0020410.1 Flavonoid IFS low borderline
Sspp01G0025000.1 Flavonoid IFS medium borderline
Sspp01G0027700.1 Flavonoid IFS low borderline
Sspp01G0027710.1 Flavonoid IFS low borderline
Sspp01G0027720.1 Flavonoid IFS low borderline
Sspp01G0027850.1 Flavonoid IFS medium borderline
Sspp01G0027870.1 Flavonoid IFS medium borderline