PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1512
Candidate Protein Records
1344
Pathway-Level Records
3358
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sspp10G0012060.1 Terpenoid CYP76 low borderline
Sspp10G0012070.1 Terpenoid CYP76 low borderline
Sspp10G0013240.1 Terpenoid CYP76 medium pass
Sspp10G0014310.1 Terpenoid CYP76 medium pass
Sspp10G0014320.1 Terpenoid CYP76 medium pass
Sspp10G0016030.1 Terpenoid CYP76 low borderline
SsppSh_001C110000070.1 Terpenoid CYP76 medium pass
SsppSh_003E120000200.1 Terpenoid CYP76 medium borderline
SsppSh_003E120000230.1 Terpenoid CYP76 medium pass
SsppSh_003E120000240.1 Terpenoid CYP76 medium borderline
SsppSh_003E120000250.1 Terpenoid CYP76 medium borderline
SsppSh_201C120001720.1 Terpenoid CYP76 low borderline
SsppSh_236C090007060.1 Terpenoid CYP76 low borderline
Sspp03G0006980.1 Terpenoid DXR medium pass
Sspp02G0008260.1 Terpenoid FPPS medium pass
Sspp02G0008290.1 Terpenoid FPPS medium pass
Sspp02G0008310.1 Terpenoid FPPS medium pass
Sspp03G0018750.1 Terpenoid FPPS medium pass
Sspp03G0026760.1 Terpenoid FPPS medium pass
Sspp09G0017260.1 Terpenoid FPPS medium pass
Sspp09G0017270.1 Terpenoid FPPS low borderline
Sspp10G0004860.1 Terpenoid FPPS medium pass
Sspp02G0025770.1 Terpenoid GGPPS medium borderline
Sspp03G0007520.1 Terpenoid GGPPS medium borderline
Sspp04G0021150.1 Terpenoid GGPPS medium borderline
Sspp07G0005880.1 Terpenoid GGPPS medium borderline
Sspp09G0019550.1 Terpenoid GGPPS medium borderline
Sspp09G0019560.1 Terpenoid GGPPS medium borderline
Sspp01G0007960.1 Terpenoid HDR/IspH medium pass
Sspp01G0007970.1 Terpenoid HDR/IspH high pass
Sspp04G0014240.1 Terpenoid HDS/IspG high pass
Sspp07G0016480.1 Terpenoid HMGR medium pass
Sspp07G0016490.1 Terpenoid HMGR medium pass
Sspp01G0043640.1 Terpenoid HMGS medium pass
Sspp02G0018220.1 Terpenoid HMGS high pass
Sspp07G0014280.1 Terpenoid HMGS medium pass
Sspp07G0014290.1 Terpenoid HMGS medium pass
Sspp02G0024020.1 Terpenoid IDI medium pass
Sspp02G0024040.1 Terpenoid IDI medium pass
Sspp09G0010770.1 Terpenoid IDI medium pass
Sspp06G0015290.1 Terpenoid MCT/IspD low borderline
Sspp07G0006600.1 Terpenoid MCT/IspD low borderline
Sspp04G0020690.1 Terpenoid MDS/IspF high pass
Sspp04G0025250.1 Terpenoid MVD medium pass
SsppSh_222L190005170.1 Terpenoid MVD low borderline
Sspp01G0001750.1 Terpenoid MVK low borderline
Sspp04G0027760.1 Terpenoid MVK low borderline
Sspp09G0012780.1 Terpenoid MVK low borderline
Sspp01G0035050.1 Terpenoid PMK medium pass
Sspp01G0019720.1 Terpenoid TPS medium pass