PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1674
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Smil00G0002470.1 Alkaloid 7DLH medium borderline
Smil00G0004990.1 Alkaloid 7DLH medium borderline
Smil00G0005000.1 Alkaloid 7DLH medium borderline
Smil00G0005110.1 Alkaloid 7DLH medium borderline
Smil00G0005120.1 Alkaloid 7DLH medium borderline
Smil00G0016350.1 Alkaloid 7DLH medium borderline
Smil00G0024430.1 Alkaloid 7DLH medium borderline
Smil01G0003980.1 Alkaloid 7DLH medium borderline
Smil01G0004000.1 Alkaloid 7DLH medium borderline
Smil01G0009510.1 Alkaloid 7DLH medium borderline
Smil02G0018060.1 Alkaloid 7DLH medium borderline
Smil03G0010340.1 Alkaloid 7DLH medium borderline
Smil03G0010350.1 Alkaloid 7DLH medium borderline
Smil03G0010370.1 Alkaloid 7DLH medium borderline
Smil03G0010380.1 Alkaloid 7DLH medium borderline
Smil03G0030130.1 Alkaloid 7DLH medium borderline
Smil03G0035520.1 Alkaloid 7DLH medium borderline
Smil03G0035530.1 Alkaloid 7DLH medium borderline
Smil03G0035540.1 Alkaloid 7DLH medium borderline
Smil03G0035550.1 Alkaloid 7DLH medium borderline
Smil03G0035560.1 Alkaloid 7DLH medium borderline
Smil03G0035580.1 Alkaloid 7DLH medium borderline
Smil03G0035600.1 Alkaloid 7DLH medium borderline
Smil03G0035610.1 Alkaloid 7DLH medium borderline
Smil03G0035620.1 Alkaloid 7DLH medium borderline
Smil03G0035630.1 Alkaloid 7DLH medium borderline
Smil03G0035640.1 Alkaloid 7DLH medium borderline
Smil03G0035650.1 Alkaloid 7DLH medium borderline
Smil03G0035660.1 Alkaloid 7DLH medium borderline
Smil03G0035790.1 Alkaloid 7DLH medium borderline
Smil03G0035810.1 Alkaloid 7DLH medium borderline
Smil03G0035820.1 Alkaloid 7DLH medium borderline
Smil03G0035840.1 Alkaloid 7DLH medium borderline
Smil04G0024560.1 Alkaloid 7DLH medium borderline
Smil05G0013200.1 Alkaloid 7DLH low borderline
Smil05G0022580.1 Alkaloid 7DLH medium borderline
Smil05G0024870.1 Alkaloid 7DLH medium borderline
Smil05G0024880.1 Alkaloid 7DLH medium borderline
Smil05G0024910.1 Alkaloid 7DLH medium borderline
Smil06G0017990.1 Alkaloid 7DLH medium borderline
Smil07G0020000.1 Alkaloid 7DLH medium borderline
SmilGWHAOSJ000006510008690.1 Alkaloid 7DLH medium borderline
SmilGWHAOSJ000009440014720.1 Alkaloid 7DLH medium borderline