PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1924
Candidate Protein Records
1674
Pathway-Level Records
4437
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
Smil00G0002040.1 Flavonoid F3H low borderline
Smil00G0007910.1 Flavonoid F3H medium borderline
Smil00G0013700.1 Flavonoid F3H medium borderline
Smil00G0013720.1 Flavonoid F3H medium borderline
Smil00G0015150.1 Flavonoid F3H medium borderline
Smil00G0035070.1 Flavonoid F3H low borderline
Smil00G0040150.1 Flavonoid F3H medium borderline
Smil00G0040160.1 Flavonoid F3H medium borderline
Smil00G0042750.1 Flavonoid F3H medium borderline
Smil01G0003070.1 Flavonoid F3H low borderline
Smil01G0006680.1 Flavonoid F3H medium borderline
Smil01G0010350.1 Flavonoid F3H medium borderline
Smil01G0012980.1 Flavonoid F3H medium borderline
Smil01G0013060.1 Flavonoid F3H medium borderline
Smil01G0013080.1 Flavonoid F3H medium borderline
Smil01G0013100.1 Flavonoid F3H medium borderline
Smil01G0013110.1 Flavonoid F3H medium borderline
Smil01G0013130.1 Flavonoid F3H medium borderline
Smil01G0013140.1 Flavonoid F3H medium borderline
Smil01G0013160.1 Flavonoid F3H medium borderline
Smil01G0015210.1 Flavonoid F3H medium borderline
Smil01G0027600.1 Flavonoid F3H low borderline
Smil01G0030240.1 Flavonoid F3H low borderline
Smil02G0005390.1 Flavonoid F3H medium borderline
Smil02G0012970.1 Flavonoid F3H medium borderline
Smil02G0012980.1 Flavonoid F3H medium borderline
Smil02G0033990.1 Flavonoid F3H low borderline
Smil03G0003320.1 Flavonoid F3H medium borderline
Smil03G0010690.1 Flavonoid F3H medium pass
Smil03G0010720.1 Flavonoid F3H medium borderline
Smil03G0010730.1 Flavonoid F3H low borderline
Smil03G0014020.1 Flavonoid F3H medium borderline
Smil03G0014310.1 Flavonoid F3H medium borderline
Smil03G0016060.1 Flavonoid F3H medium borderline
Smil03G0016100.1 Flavonoid F3H medium borderline
Smil03G0016750.1 Flavonoid F3H medium borderline
Smil03G0016760.1 Flavonoid F3H medium borderline
Smil03G0018340.1 Flavonoid F3H medium pass
Smil03G0025840.1 Flavonoid F3H medium borderline
Smil03G0037290.1 Flavonoid F3H medium borderline
Smil04G0004030.1 Flavonoid F3H medium borderline
Smil04G0007660.1 Flavonoid F3H medium borderline
Smil04G0013750.1 Flavonoid F3H medium borderline
Smil04G0014380.1 Flavonoid F3H low borderline
Smil04G0016870.1 Flavonoid F3H medium borderline
Smil04G0018460.1 Flavonoid F3H medium borderline
Smil04G0021470.1 Flavonoid F3H low borderline
Smil04G0021900.1 Flavonoid F3H medium borderline
Smil04G0021910.1 Flavonoid F3H low borderline
Smil04G0021930.1 Flavonoid F3H low borderline