PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1674
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Smil00G0026390.1 Rosmarinic Acid 4CL medium pass
Smil00G0035230.1 Rosmarinic Acid 4CL medium pass
Smil00G0040380.1 Rosmarinic Acid 4CL low borderline
Smil00G0047430.1 Rosmarinic Acid 4CL medium pass
Smil01G0006480.1 Rosmarinic Acid 4CL medium pass
Smil01G0008000.1 Rosmarinic Acid 4CL medium pass
Smil01G0008010.1 Rosmarinic Acid 4CL medium pass
Smil01G0009540.1 Rosmarinic Acid 4CL medium pass
Smil01G0016930.1 Rosmarinic Acid 4CL low borderline
Smil01G0025560.1 Rosmarinic Acid 4CL low borderline
Smil01G0026650.1 Rosmarinic Acid 4CL medium pass
Smil01G0026830.1 Rosmarinic Acid 4CL medium pass
Smil02G0006000.1 Rosmarinic Acid 4CL low borderline
Smil02G0007300.1 Rosmarinic Acid 4CL medium pass
Smil02G0023210.1 Rosmarinic Acid 4CL low borderline
Smil02G0032370.1 Rosmarinic Acid 4CL low borderline
Smil03G0000280.1 Rosmarinic Acid 4CL low borderline
Smil03G0016440.1 Rosmarinic Acid 4CL low borderline
Smil03G0026740.1 Rosmarinic Acid 4CL medium pass
Smil03G0027060.1 Rosmarinic Acid 4CL low borderline
Smil03G0030000.1 Rosmarinic Acid 4CL medium pass
Smil03G0031530.1 Rosmarinic Acid 4CL medium pass
Smil04G0006710.1 Rosmarinic Acid 4CL medium pass
Smil04G0015880.1 Rosmarinic Acid 4CL medium pass
Smil04G0016280.1 Rosmarinic Acid 4CL low borderline
Smil04G0017790.1 Rosmarinic Acid 4CL medium pass
Smil04G0023100.1 Rosmarinic Acid 4CL medium pass
Smil04G0023110.1 Rosmarinic Acid 4CL medium pass
Smil04G0028420.1 Rosmarinic Acid 4CL low borderline
Smil05G0017790.1 Rosmarinic Acid 4CL low borderline
Smil05G0019370.1 Rosmarinic Acid 4CL medium pass
Smil05G0023750.1 Rosmarinic Acid 4CL low borderline
Smil06G0020140.1 Rosmarinic Acid 4CL medium pass
Smil06G0020350.1 Rosmarinic Acid 4CL medium pass
Smil06G0020380.1 Rosmarinic Acid 4CL medium pass
Smil06G0020390.1 Rosmarinic Acid 4CL medium pass
Smil06G0020400.1 Rosmarinic Acid 4CL medium pass
Smil06G0022200.1 Rosmarinic Acid 4CL medium pass
Smil06G0024540.1 Rosmarinic Acid 4CL low borderline
Smil06G0031290.1 Rosmarinic Acid 4CL medium pass
Smil07G0002560.1 Rosmarinic Acid 4CL medium pass
Smil07G0004050.1 Rosmarinic Acid 4CL medium pass
Smil07G0006920.1 Rosmarinic Acid 4CL medium pass
Smil07G0009250.1 Rosmarinic Acid 4CL medium pass
Smil00G0002080.1 Rosmarinic Acid C4H medium pass
Smil00G0002470.1 Rosmarinic Acid C4H low borderline
Smil00G0005110.1 Rosmarinic Acid C4H low borderline
Smil00G0007880.1 Rosmarinic Acid C4H low borderline
Smil00G0013730.1 Rosmarinic Acid C4H low borderline
Smil00G0013740.1 Rosmarinic Acid C4H low borderline