PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1674
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Smil02G0007600.1 Flavonoid ANR medium borderline
Smil02G0007610.1 Flavonoid ANR medium borderline
Smil02G0007630.1 Flavonoid ANR medium borderline
Smil02G0033010.1 Flavonoid ANR high pass
Smil03G0023620.1 Flavonoid ANR low borderline
Smil04G0031060.1 Flavonoid ANR low borderline
Smil05G0013580.1 Flavonoid ANR medium borderline
Smil05G0017370.1 Flavonoid ANR medium borderline
Smil05G0023720.1 Flavonoid ANR medium borderline
Smil05G0028830.1 Flavonoid ANR low borderline
Smil05G0030750.1 Flavonoid ANR medium borderline
Smil05G0030760.1 Flavonoid ANR medium borderline
Smil06G0001060.1 Flavonoid ANR medium borderline
Smil06G0003900.1 Flavonoid ANR medium borderline
Smil06G0003920.1 Flavonoid ANR medium borderline
Smil06G0003940.1 Flavonoid ANR medium borderline
Smil06G0003950.1 Flavonoid ANR medium borderline
Smil06G0008090.1 Flavonoid ANR medium borderline
Smil06G0028130.1 Flavonoid ANR medium borderline
Smil06G0028170.1 Flavonoid ANR medium borderline
SmilGWHAOSJ000000700000310.1 Flavonoid ANR medium pass
SmilGWHAOSJ000002420002120.1 Flavonoid ANR low borderline
Smil00G0019020.1 Flavonoid ANS/LDOX medium borderline
Smil00G0019740.1 Flavonoid ANS/LDOX low borderline
Smil01G0030220.1 Flavonoid ANS/LDOX medium borderline
Smil02G0006060.1 Flavonoid ANS/LDOX medium borderline
Smil03G0024210.1 Flavonoid ANS/LDOX low borderline
Smil05G0003650.1 Flavonoid ANS/LDOX low borderline
Smil05G0004250.1 Flavonoid ANS/LDOX medium pass
Smil07G0005380.1 Flavonoid ANS/LDOX medium pass
SmilGWHAOSJ000007640010650.1 Flavonoid ANS/LDOX medium borderline
Smil01G0007350.1 Flavonoid C4H medium borderline
Smil03G0035640.1 Flavonoid C4H medium borderline
Smil04G0023700.1 Flavonoid C4H medium borderline
Smil04G0023710.1 Flavonoid C4H medium borderline
Smil04G0029190.1 Flavonoid C4H low borderline
Smil05G0001500.1 Flavonoid C4H low borderline
Smil05G0024910.1 Flavonoid C4H medium borderline
Smil06G0002070.1 Flavonoid C4H medium borderline
Smil02G0006740.1 Flavonoid CHI medium pass
Smil02G0021640.1 Flavonoid CHI medium pass
Smil07G0005420.1 Flavonoid CHI medium pass
Smil07G0013840.1 Flavonoid CHI medium pass
Smil00G0041710.1 Flavonoid CHS medium pass
Smil02G0000830.1 Flavonoid CHS medium pass
Smil02G0000840.1 Flavonoid CHS medium pass
Smil02G0000880.1 Flavonoid CHS medium pass
Smil02G0002330.1 Flavonoid CHS medium pass
Smil03G0003660.1 Flavonoid CHS medium pass
Smil04G0025870.1 Flavonoid CHS medium pass