PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1924
Candidate Protein Records
1674
Pathway-Level Records
4437
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Smil06G0024540.1 Flavonoid 4CL low borderline
Smil06G0031290.1 Flavonoid 4CL medium pass
Smil07G0002560.1 Flavonoid 4CL medium pass
Smil07G0004050.1 Flavonoid 4CL medium pass
Smil07G0006920.1 Flavonoid 4CL medium pass
Smil07G0009250.1 Flavonoid 4CL medium pass
Smil00G0005670.1 Flavonoid ANR medium borderline
Smil00G0006270.1 Flavonoid ANR low borderline
Smil00G0007780.1 Flavonoid ANR medium borderline
Smil00G0035240.1 Flavonoid ANR medium borderline
Smil00G0036100.1 Flavonoid ANR low borderline
Smil00G0036120.1 Flavonoid ANR medium borderline
Smil00G0037540.1 Flavonoid ANR low borderline
Smil02G0007600.1 Flavonoid ANR medium borderline
Smil02G0007610.1 Flavonoid ANR medium borderline
Smil02G0007630.1 Flavonoid ANR medium borderline
Smil02G0033010.1 Flavonoid ANR high pass
Smil03G0023620.1 Flavonoid ANR low borderline
Smil04G0031060.1 Flavonoid ANR low borderline
Smil05G0013580.1 Flavonoid ANR medium borderline
Smil05G0017370.1 Flavonoid ANR medium borderline
Smil05G0023720.1 Flavonoid ANR medium borderline
Smil05G0028830.1 Flavonoid ANR low borderline
Smil05G0030750.1 Flavonoid ANR medium borderline
Smil05G0030760.1 Flavonoid ANR medium borderline
Smil06G0001060.1 Flavonoid ANR medium borderline
Smil06G0003900.1 Flavonoid ANR medium borderline
Smil06G0003920.1 Flavonoid ANR medium borderline
Smil06G0003940.1 Flavonoid ANR medium borderline
Smil06G0003950.1 Flavonoid ANR medium borderline
Smil06G0008090.1 Flavonoid ANR medium borderline
Smil06G0028130.1 Flavonoid ANR medium borderline
Smil06G0028170.1 Flavonoid ANR medium borderline
SmilGWHAOSJ000000700000310.1 Flavonoid ANR medium pass
SmilGWHAOSJ000002420002120.1 Flavonoid ANR low borderline
Smil00G0019020.1 Flavonoid ANS/LDOX medium borderline
Smil00G0019740.1 Flavonoid ANS/LDOX low borderline
Smil01G0030220.1 Flavonoid ANS/LDOX medium borderline
Smil02G0006060.1 Flavonoid ANS/LDOX medium borderline
Smil03G0024210.1 Flavonoid ANS/LDOX low borderline
Smil05G0003650.1 Flavonoid ANS/LDOX low borderline
Smil05G0004250.1 Flavonoid ANS/LDOX medium pass
Smil07G0005380.1 Flavonoid ANS/LDOX medium pass
SmilGWHAOSJ000007640010650.1 Flavonoid ANS/LDOX medium borderline
Smil01G0007350.1 Flavonoid C4H medium borderline
Smil03G0035640.1 Flavonoid C4H medium borderline
Smil04G0023700.1 Flavonoid C4H medium borderline
Smil04G0023710.1 Flavonoid C4H medium borderline
Smil04G0029190.1 Flavonoid C4H low borderline
Smil05G0001500.1 Flavonoid C4H low borderline