PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1924
Candidate Protein Records
1674
Pathway-Level Records
4437
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Smil04G0021900.1 Flavonoid F3H medium borderline
Smil04G0021910.1 Flavonoid F3H low borderline
Smil04G0021930.1 Flavonoid F3H low borderline
Smil04G0021940.1 Flavonoid F3H low borderline
Smil04G0021950.1 Flavonoid F3H low borderline
Smil04G0022490.1 Flavonoid F3H low borderline
Smil04G0023370.1 Flavonoid F3H low borderline
Smil04G0023940.1 Flavonoid F3H medium borderline
Smil04G0026940.1 Flavonoid F3H medium borderline
Smil04G0030310.1 Flavonoid F3H medium borderline
Smil04G0030340.1 Flavonoid F3H medium borderline
Smil04G0030350.1 Flavonoid F3H medium borderline
Smil04G0030360.1 Flavonoid F3H medium borderline
Smil04G0030370.1 Flavonoid F3H medium borderline
Smil04G0030380.1 Flavonoid F3H medium borderline
Smil04G0030390.1 Flavonoid F3H medium borderline
Smil04G0030400.1 Flavonoid F3H medium borderline
Smil04G0031030.1 Flavonoid F3H medium borderline
Smil05G0001060.1 Flavonoid F3H medium borderline
Smil05G0001070.1 Flavonoid F3H medium borderline
Smil05G0001080.1 Flavonoid F3H medium borderline
Smil05G0001090.1 Flavonoid F3H medium borderline
Smil05G0001100.1 Flavonoid F3H medium borderline
Smil05G0001110.1 Flavonoid F3H medium borderline
Smil05G0001120.1 Flavonoid F3H medium borderline
Smil05G0001700.1 Flavonoid F3H medium borderline
Smil05G0004270.1 Flavonoid F3H medium borderline
Smil05G0005200.1 Flavonoid F3H medium borderline
Smil05G0007710.1 Flavonoid F3H medium borderline
Smil05G0008530.1 Flavonoid F3H medium borderline
Smil05G0009110.1 Flavonoid F3H low borderline
Smil05G0020040.1 Flavonoid F3H medium borderline
Smil05G0022250.1 Flavonoid F3H medium borderline
Smil06G0000470.1 Flavonoid F3H low borderline
Smil06G0001130.1 Flavonoid F3H medium borderline
Smil06G0006180.1 Flavonoid F3H medium borderline
Smil06G0010040.1 Flavonoid F3H medium borderline
Smil06G0016520.1 Flavonoid F3H low borderline
Smil06G0016540.1 Flavonoid F3H low borderline
Smil06G0028230.1 Flavonoid F3H medium borderline
Smil06G0028350.1 Flavonoid F3H medium pass
Smil06G0031570.1 Flavonoid F3H medium borderline
Smil07G0002890.1 Flavonoid F3H medium borderline
Smil07G0005350.1 Flavonoid F3H medium borderline
Smil07G0005370.1 Flavonoid F3H medium borderline
Smil07G0005390.1 Flavonoid F3H medium borderline
Smil07G0005400.1 Flavonoid F3H medium borderline
Smil07G0005470.1 Flavonoid F3H medium borderline
Smil07G0008750.1 Flavonoid F3H low borderline
Smil07G0020090.1 Flavonoid F3H low borderline