PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
Reset
Gene Pathway Family Confidence Status Best Target
Scup1640390019740 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1812350073890 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1817630078060 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1829110094650 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1842800120000 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1844090123090 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1844090123120 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1869230203320 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1873470222130 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1640390019740 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1812350073890 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1817630078060 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1829110094650 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1842800120000 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1844090123090 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1844090123120 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1869230203320 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1873470222130 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1640390019740 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1812350073890 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1817630078060 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1829110094650 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1842800120000 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1844090123090 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scup1844090123120 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1869230203320 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Scup1873470222130 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR