PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Scup1783610049540 Terpenoid AACT medium borderline
Scup1844610124720 Terpenoid AACT medium borderline
Scup1860980171060 Terpenoid AACT medium borderline
Scup1862400175120 Terpenoid AACT low borderline
Scup1151020001280 Terpenoid BAHD low borderline
Scup127870005840 Terpenoid BAHD medium pass
Scup1376970008100 Terpenoid BAHD medium pass
Scup1459950009180 Terpenoid BAHD low borderline
Scup1465360009570 Terpenoid BAHD medium pass
Scup1538280011550 Terpenoid BAHD medium pass
Scup1634660018250 Terpenoid BAHD medium pass
Scup1712020025370 Terpenoid BAHD low borderline
Scup1718380028820 Terpenoid BAHD medium pass
Scup1718860029180 Terpenoid BAHD low borderline
Scup1746580034210 Terpenoid BAHD medium pass
Scup1780750047410 Terpenoid BAHD low borderline
Scup1783400049340 Terpenoid BAHD medium pass
Scup1785040050300 Terpenoid BAHD medium pass
Scup1788500052220 Terpenoid BAHD medium pass
Scup1789000052550 Terpenoid BAHD low borderline
Scup1794520058790 Terpenoid BAHD medium pass
Scup1794740059200 Terpenoid BAHD medium pass
Scup1809720070830 Terpenoid BAHD medium pass
Scup1813550074430 Terpenoid BAHD medium pass
Scup1816180076220 Terpenoid BAHD medium pass
Scup1820450081420 Terpenoid BAHD medium pass
Scup1821650083500 Terpenoid BAHD medium pass
Scup1821970083910 Terpenoid BAHD medium pass
Scup1823380086200 Terpenoid BAHD low borderline
Scup1823640086490 Terpenoid BAHD low borderline
Scup1827510091230 Terpenoid BAHD low borderline
Scup1827820091580 Terpenoid BAHD low borderline
Scup1828070092150 Terpenoid BAHD medium pass
Scup1828090092340 Terpenoid BAHD medium pass
Scup1828140092430 Terpenoid BAHD medium pass
Scup1828250092770 Terpenoid BAHD medium borderline
Scup1829490094970 Terpenoid BAHD medium pass
Scup1830570097470 Terpenoid BAHD medium pass
Scup1831290098510 Terpenoid BAHD medium pass
Scup1831400098990 Terpenoid BAHD medium pass
Scup1834010102340 Terpenoid BAHD medium pass
Scup1834170102530 Terpenoid BAHD medium pass
Scup1835800106240 Terpenoid BAHD medium pass
Scup1838240110690 Terpenoid BAHD medium pass
Scup1838740111930 Terpenoid BAHD low borderline
Scup1838740111940 Terpenoid BAHD low borderline
Scup1839150113430 Terpenoid BAHD low borderline
Scup1842900120400 Terpenoid BAHD medium pass
Scup1844920125430 Terpenoid BAHD medium pass
Scup1845280125980 Terpenoid BAHD medium pass