PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status
Scup1845890127060 Terpenoid BAHD low borderline
Scup1847700131180 Terpenoid BAHD medium pass
Scup1847790131470 Terpenoid BAHD medium pass
Scup1848190132910 Terpenoid BAHD medium pass
Scup1849030135250 Terpenoid BAHD low borderline
Scup1850350138730 Terpenoid BAHD low borderline
Scup1851480141800 Terpenoid BAHD medium pass
Scup1851920143380 Terpenoid BAHD low borderline
Scup1852890146290 Terpenoid BAHD low borderline
Scup1853150147040 Terpenoid BAHD medium pass
Scup1854040148500 Terpenoid BAHD low borderline
Scup1854070148510 Terpenoid BAHD low borderline
Scup1854360149380 Terpenoid BAHD low borderline
Scup1854360149410 Terpenoid BAHD low borderline
Scup1855420152590 Terpenoid BAHD medium pass
Scup1856390156880 Terpenoid BAHD medium pass
Scup1856660157560 Terpenoid BAHD medium pass
Scup1856770157970 Terpenoid BAHD medium pass
Scup1857080158630 Terpenoid BAHD medium pass
Scup1859720166670 Terpenoid BAHD medium pass
Scup1861030171180 Terpenoid BAHD low borderline
Scup1861270171830 Terpenoid BAHD medium pass
Scup1861620172680 Terpenoid BAHD medium pass
Scup1862650176000 Terpenoid BAHD medium pass
Scup1863340178230 Terpenoid BAHD low borderline
Scup1863750179580 Terpenoid BAHD medium pass
Scup1864750184050 Terpenoid BAHD medium pass
Scup1865980188540 Terpenoid BAHD low borderline
Scup1866030188810 Terpenoid BAHD medium pass
Scup1867020193070 Terpenoid BAHD low borderline
Scup1867720197340 Terpenoid BAHD medium pass
Scup1868280199540 Terpenoid BAHD medium pass
Scup1868280199550 Terpenoid BAHD medium pass
Scup1869300203700 Terpenoid BAHD medium pass
Scup1869330203900 Terpenoid BAHD medium pass
Scup1870150207480 Terpenoid BAHD medium pass
Scup1870180207600 Terpenoid BAHD low borderline
Scup1870710210450 Terpenoid BAHD medium pass
Scup1871010211840 Terpenoid BAHD medium pass
Scup1871390213620 Terpenoid BAHD medium pass
Scup1872970220520 Terpenoid BAHD medium pass
Scup1874630223940 Terpenoid BAHD medium pass
Scup580227060 Terpenoid BAHD medium pass
Scup1401120009010 Terpenoid CMK/IspE low borderline
Scup1863750179550 Terpenoid CMK/IspE high pass
Scup1195100004030 Terpenoid CYP71 low borderline
Scup1195390004110 Terpenoid CYP71 low borderline
Scup1640440019810 Terpenoid CYP71 low borderline
Scup1712120025470 Terpenoid CYP71 medium pass
Scup1718750029060 Terpenoid CYP71 medium pass