PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Scup1743120032630 Terpenoid CYP71 low borderline
Scup1770210044530 Terpenoid CYP71 low borderline
Scup1789910053680 Terpenoid CYP71 medium pass
Scup1801310062290 Terpenoid CYP71 medium pass
Scup1815060075020 Terpenoid CYP71 medium pass
Scup1838020110290 Terpenoid CYP71 medium pass
Scup1841100116130 Terpenoid CYP71 low borderline
Scup1841650117060 Terpenoid CYP71 medium pass
Scup1841690117330 Terpenoid CYP71 medium pass
Scup1843870122370 Terpenoid CYP71 medium pass
Scup1843870122380 Terpenoid CYP71 medium pass
Scup1846710129150 Terpenoid CYP71 medium pass
Scup1847990132060 Terpenoid CYP71 low borderline
Scup1850070138110 Terpenoid CYP71 medium borderline
Scup1871920215570 Terpenoid CYP71 low borderline
Scup1872010215970 Terpenoid CYP71 low borderline
Scup117170002410 Terpenoid CYP76 medium borderline
Scup1347580006350 Terpenoid CYP76 medium pass
Scup1371880008080 Terpenoid CYP76 medium pass
Scup1511640010040 Terpenoid CYP76 medium pass
Scup1536500010790 Terpenoid CYP76 medium borderline
Scup1637070018800 Terpenoid CYP76 low borderline
Scup1712880026200 Terpenoid CYP76 medium borderline
Scup1712880026210 Terpenoid CYP76 low borderline
Scup1717100028290 Terpenoid CYP76 low borderline
Scup1723050030890 Terpenoid CYP76 low borderline
Scup1747650034890 Terpenoid CYP76 medium borderline
Scup1752750036480 Terpenoid CYP76 medium pass
Scup1753770037260 Terpenoid CYP76 medium borderline
Scup1760540038450 Terpenoid CYP76 medium borderline
Scup1767250042340 Terpenoid CYP76 medium pass
Scup1767690042690 Terpenoid CYP76 medium borderline
Scup1767690042700 Terpenoid CYP76 medium pass
Scup1786040051400 Terpenoid CYP76 low borderline
Scup1790110054170 Terpenoid CYP76 low borderline
Scup1790120054220 Terpenoid CYP76 medium pass
Scup1808500069020 Terpenoid CYP76 medium borderline
Scup1811420072740 Terpenoid CYP76 low borderline
Scup1812000073420 Terpenoid CYP76 low borderline
Scup1817180077370 Terpenoid CYP76 low borderline
Scup1817650078110 Terpenoid CYP76 medium pass
Scup1828310092970 Terpenoid CYP76 medium pass
Scup1829520095050 Terpenoid CYP76 medium pass
Scup1834320102770 Terpenoid CYP76 medium pass
Scup1834830103840 Terpenoid CYP76 medium borderline
Scup1837010108520 Terpenoid CYP76 medium pass
Scup1838320110890 Terpenoid CYP76 medium pass
Scup1838330110900 Terpenoid CYP76 medium borderline
Scup1839030113030 Terpenoid CYP76 medium pass
Scup1840300114860 Terpenoid CYP76 medium borderline