PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

829
Candidate Protein Records
552
Pathway-Level Records
1531
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Scup1863050177180 Flavonoid F3H medium borderline
Scup1863680179240 Flavonoid F3H low borderline
Scup1864660183480 Flavonoid F3H medium borderline
Scup1865020184700 Flavonoid F3H medium borderline
Scup1865220185660 Flavonoid F3H medium borderline
Scup1865480186790 Flavonoid F3H low borderline
Scup1865710187570 Flavonoid F3H low borderline
Scup1867390195060 Flavonoid F3H low borderline
Scup1868770201400 Flavonoid F3H medium borderline
Scup1869230203370 Flavonoid F3H low borderline
Scup1870460209070 Flavonoid F3H medium borderline
Scup1870520209450 Flavonoid F3H medium pass
Scup1870820210960 Flavonoid F3H low borderline
Scup1871120212260 Flavonoid F3H medium borderline
Scup1871730215000 Flavonoid F3H medium borderline
Scup1871830215290 Flavonoid F3H medium borderline
Scup1875220224460 Flavonoid F3H medium borderline
Scup1870520209460 Flavonoid FLS medium borderline
Scup1637070018800 Flavonoid FNS medium borderline
Scup1712880026210 Flavonoid FNS medium borderline
Scup1790110054170 Flavonoid FNS medium borderline
Scup1844300123800 Flavonoid FNS low borderline
Scup1851650142440 Flavonoid FNS medium borderline
Scup1854850150770 Flavonoid FNS medium borderline
Scup1861180171540 Flavonoid FNS medium borderline
Scup1863080177220 Flavonoid FNS medium borderline
Scup1863450178560 Flavonoid FNS medium borderline
Scup1867380195050 Flavonoid FNS medium borderline
Scup1868130198450 Flavonoid FNS medium borderline
Scup1392140008750 Flavonoid IFR low borderline
Scup1649870020310 Flavonoid IFR low borderline
Scup1649880020340 Flavonoid IFR low borderline
Scup1701830023650 Flavonoid IFR medium pass
Scup1720650030160 Flavonoid IFR low borderline
Scup1723110030900 Flavonoid IFR low borderline
Scup1760520038440 Flavonoid IFR low borderline
Scup1766620041500 Flavonoid IFR low borderline
Scup1770240044580 Flavonoid IFR low borderline
Scup1770670044830 Flavonoid IFR low borderline
Scup1779640047150 Flavonoid IFR low borderline
Scup1781580048400 Flavonoid IFR low borderline
Scup1796010060290 Flavonoid IFR low borderline
Scup1796010060300 Flavonoid IFR low borderline
Scup1802760063540 Flavonoid IFR low borderline
Scup1802940063640 Flavonoid IFR medium pass
Scup1809420070030 Flavonoid IFR medium borderline
Scup1817570077970 Flavonoid IFR high pass
Scup1820020080400 Flavonoid IFR low borderline
Scup1828040092110 Flavonoid IFR low borderline
Scup1828270092850 Flavonoid IFR low borderline