PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Scup1701820023590 Alkaloid CNMT low borderline
Scup1770180044490 Alkaloid CNMT low borderline
Scup1792040055650 Alkaloid CNMT medium borderline
Scup1792930056900 Alkaloid CNMT low borderline
Scup1842980120580 Alkaloid CNMT low borderline
Scup1855500152930 Alkaloid CNMT low borderline
Scup1876010225150 Alkaloid CNMT low borderline
Scup1464840009530 Alkaloid CODM/T6ODM medium borderline
Scup1746410034170 Alkaloid CODM/T6ODM medium borderline
Scup1782850049050 Alkaloid CODM/T6ODM medium borderline
Scup1784820050220 Alkaloid CODM/T6ODM medium borderline
Scup1784820050230 Alkaloid CODM/T6ODM medium borderline
Scup1789600053170 Alkaloid CODM/T6ODM medium borderline
Scup1791380055300 Alkaloid CODM/T6ODM medium borderline
Scup1802440063150 Alkaloid CODM/T6ODM medium borderline
Scup1820050080430 Alkaloid CODM/T6ODM medium borderline
Scup1831520099340 Alkaloid CODM/T6ODM medium borderline
Scup1841780117760 Alkaloid CODM/T6ODM medium borderline
Scup1844050122910 Alkaloid CODM/T6ODM medium borderline
Scup1849080135570 Alkaloid CODM/T6ODM medium borderline
Scup1850760139680 Alkaloid CODM/T6ODM medium borderline
Scup1855850154700 Alkaloid CODM/T6ODM medium borderline
Scup1858160162340 Alkaloid CODM/T6ODM medium borderline
Scup1859380165480 Alkaloid CODM/T6ODM medium borderline
Scup1861170171440 Alkaloid CODM/T6ODM medium borderline
Scup1864660183480 Alkaloid CODM/T6ODM medium borderline
Scup1865020184700 Alkaloid CODM/T6ODM medium borderline
Scup1865220185660 Alkaloid CODM/T6ODM medium borderline
Scup1865710187570 Alkaloid CODM/T6ODM medium borderline
Scup1868770201400 Alkaloid CODM/T6ODM medium borderline
Scup1870520209450 Alkaloid CODM/T6ODM medium borderline
Scup1870820210960 Alkaloid CODM/T6ODM medium borderline
Scup1871520214200 Alkaloid CODM/T6ODM medium borderline
Scup1871730215000 Alkaloid CODM/T6ODM medium borderline
Scup1875220224460 Alkaloid CODM/T6ODM medium borderline
Scup1466060009760 Alkaloid COR medium pass
Scup1668340021930 Alkaloid COR medium pass
Scup1782080048650 Alkaloid COR medium pass
Scup1792550056500 Alkaloid COR medium pass
Scup1830310096770 Alkaloid COR low borderline
Scup1841100116140 Alkaloid COR medium pass
Scup1347580006350 Alkaloid CYP719 medium borderline
Scup1817420077740 Alkaloid CYP719 low borderline
Scup1826310089270 Alkaloid CYP719 low borderline
Scup1834320102770 Alkaloid CYP719 medium pass
Scup1856840158170 Alkaloid CYP719 medium borderline
Scup1868210199080 Alkaloid CYP719 low borderline
Scup1871610214530 Alkaloid CYP719 medium borderline
Scup1857530160570 Alkaloid CYP80B1 medium borderline
Scup1717100028290 Alkaloid G8O/G8H medium pass