PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Scup1767690042700 Alkaloid G8O/G8H medium borderline
Scup1786040051400 Alkaloid G8O/G8H low borderline
Scup1790110054170 Alkaloid G8O/G8H low borderline
Scup1828310092970 Alkaloid G8O/G8H medium borderline
Scup1838230110650 Alkaloid G8O/G8H low borderline
Scup1838320110890 Alkaloid G8O/G8H low borderline
Scup1838330110900 Alkaloid G8O/G8H medium borderline
Scup1850070138120 Alkaloid G8O/G8H low borderline
Scup1851650142440 Alkaloid G8O/G8H medium borderline
Scup1854030148470 Alkaloid G8O/G8H low borderline
Scup1856990158500 Alkaloid G8O/G8H medium borderline
Scup1863180177570 Alkaloid G8O/G8H low borderline
Scup1865340186440 Alkaloid G8O/G8H medium pass
Scup1869290203580 Alkaloid G8O/G8H low borderline
Scup1873890222930 Alkaloid G8O/G8H medium borderline
Scup1869470204640 Alkaloid GES medium pass
Scup1169650002280 Alkaloid GS medium pass
Scup1173870002730 Alkaloid GS medium pass
Scup1403310009050 Alkaloid GS medium pass
Scup1540510012470 Alkaloid GS low borderline
Scup1548550014880 Alkaloid GS low borderline
Scup1659130020950 Alkaloid GS medium pass
Scup1667690021580 Alkaloid GS medium pass
Scup1740300031950 Alkaloid GS high pass
Scup1747090034530 Alkaloid GS low borderline
Scup1752530036300 Alkaloid GS low borderline
Scup1766300041230 Alkaloid GS low borderline
Scup1801200062130 Alkaloid GS medium pass
Scup1807800068410 Alkaloid GS low borderline
Scup1820640081770 Alkaloid GS medium pass
Scup1821180082940 Alkaloid GS low borderline
Scup1844660124830 Alkaloid GS medium pass
Scup1849060135500 Alkaloid GS low borderline
Scup1849100135670 Alkaloid GS low borderline
Scup1852400144850 Alkaloid GS low borderline
Scup1852560145380 Alkaloid GS low borderline
Scup1855910154920 Alkaloid GS high pass
Scup1859030164760 Alkaloid GS high pass
Scup1868280199570 Alkaloid GS low borderline
Scup1870690210280 Alkaloid GS low borderline
Scup1871040211970 Alkaloid GS low borderline
Scup1871270212880 Alkaloid GS low borderline
Scup1872300217390 Alkaloid GS low borderline
Scup1872850220100 Alkaloid GS low borderline
Scup1712140025520 Alkaloid H6H medium borderline
Scup1830540097330 Alkaloid H6H low borderline
Scup1849100135690 Alkaloid H6H medium borderline
Scup1854190148830 Alkaloid H6H medium borderline
Scup1855630153590 Alkaloid H6H medium borderline
Scup1862840176700 Alkaloid H6H low borderline