PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Scup1816890077060 Flavonoid IFS low borderline
Scup1827380090890 Flavonoid IFS low borderline
Scup1828280092910 Flavonoid IFS low borderline
Scup1831130098100 Flavonoid IFS low borderline
Scup1831340098670 Flavonoid IFS low borderline
Scup1834830103840 Flavonoid IFS medium borderline
Scup1838320110890 Flavonoid IFS low borderline
Scup1840300114860 Flavonoid IFS medium borderline
Scup1840300114870 Flavonoid IFS low borderline
Scup1840300114880 Flavonoid IFS low borderline
Scup1840600115150 Flavonoid IFS medium borderline
Scup1841950118230 Flavonoid IFS medium borderline
Scup1844070123030 Flavonoid IFS medium borderline
Scup1844690124940 Flavonoid IFS low borderline
Scup1850070138110 Flavonoid IFS medium borderline
Scup1850810139900 Flavonoid IFS low borderline
Scup1853710147730 Flavonoid IFS low borderline
Scup1856060155840 Flavonoid IFS medium borderline
Scup1856840158170 Flavonoid IFS low borderline
Scup1861530172410 Flavonoid IFS medium borderline
Scup1865910188010 Flavonoid IFS medium borderline
Scup1866630191410 Flavonoid IFS medium borderline
Scup1867610196320 Flavonoid IFS low borderline
Scup1869290203590 Flavonoid IFS medium borderline
Scup1870110207180 Flavonoid IFS medium borderline
Scup1870340208460 Flavonoid IFS low borderline
Scup1870900211490 Flavonoid IFS low borderline
Scup1871290213040 Flavonoid IFS low borderline
Scup1871490214110 Flavonoid IFS low borderline
Scup1871490214120 Flavonoid IFS medium borderline
Scup1872170216660 Flavonoid IFS low borderline
Scup1872800219640 Flavonoid IFS low borderline
Scup1873260221370 Flavonoid IFS low borderline
Scup1877720225940 Flavonoid IFS medium borderline
Scup1640390019740 Flavonoid PAL high pass
Scup1812350073890 Flavonoid PAL high pass
Scup1817630078060 Flavonoid PAL high pass
Scup1829110094650 Flavonoid PAL high pass
Scup1842800120000 Flavonoid PAL high pass
Scup1844090123090 Flavonoid PAL high pass
Scup1844090123120 Flavonoid PAL high pass
Scup1869230203320 Flavonoid PAL high pass
Scup1873470222130 Flavonoid PAL high pass
Scup1347680006530 Flavonoid UFGT high pass
Scup1548130014770 Flavonoid UFGT medium pass
Scup1640460019930 Flavonoid UFGT medium pass
Scup1766010040930 Flavonoid UFGT medium pass
Scup1790380054420 Flavonoid UFGT medium pass
Scup1795740060090 Flavonoid UFGT high pass
Scup1803190064180 Flavonoid UFGT low borderline