PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
SOpen02G0033950.1 Rosmarinic Acid C4H medium pass
SOpen02G0033960.1 Rosmarinic Acid C4H medium pass
SOpen02G0033970.1 Rosmarinic Acid C4H medium pass
SOpen02G0033980.1 Rosmarinic Acid C4H medium pass
SOpen02G0033990.1 Rosmarinic Acid C4H low borderline
SOpen02G0034020.1 Rosmarinic Acid C4H low borderline
SOpen02G0034030.1 Rosmarinic Acid C4H low borderline
SOpen02G0034040.1 Rosmarinic Acid C4H medium pass
SOpen02G0034050.1 Rosmarinic Acid C4H low borderline
SOpen02G0035830.1 Rosmarinic Acid C4H low borderline
SOpen02G0036430.1 Rosmarinic Acid C4H medium pass
SOpen02G0037110.1 Rosmarinic Acid C4H low borderline
SOpen03G0003460.1 Rosmarinic Acid C4H low borderline
SOpen03G0003970.1 Rosmarinic Acid C4H low borderline
SOpen03G0003990.1 Rosmarinic Acid C4H low borderline
SOpen03G0011630.1 Rosmarinic Acid C4H medium pass
SOpen03G0024330.1 Rosmarinic Acid C4H low borderline
SOpen03G0026720.1 Rosmarinic Acid C4H low borderline
SOpen03G0026730.1 Rosmarinic Acid C4H low borderline
SOpen03G0026740.1 Rosmarinic Acid C4H low borderline
SOpen03G0028750.1 Rosmarinic Acid C4H low borderline
SOpen03G0029410.1 Rosmarinic Acid C4H low borderline
SOpen03G0029420.1 Rosmarinic Acid C4H low borderline
SOpen03G0029430.1 Rosmarinic Acid C4H low borderline
SOpen03G0030000.1 Rosmarinic Acid C4H medium pass
SOpen03G0030010.1 Rosmarinic Acid C4H medium pass
SOpen03G0030020.1 Rosmarinic Acid C4H medium pass
SOpen03G0030030.1 Rosmarinic Acid C4H medium pass
SOpen03G0030040.1 Rosmarinic Acid C4H medium pass
SOpen03G0030050.1 Rosmarinic Acid C4H medium pass
SOpen03G0030060.1 Rosmarinic Acid C4H medium pass
SOpen03G0030090.1 Rosmarinic Acid C4H low borderline
SOpen03G0030100.1 Rosmarinic Acid C4H low borderline
SOpen03G0030110.1 Rosmarinic Acid C4H medium pass
SOpen03G0030120.1 Rosmarinic Acid C4H low borderline
SOpen03G0030130.1 Rosmarinic Acid C4H medium pass
SOpen03G0030140.1 Rosmarinic Acid C4H medium pass
SOpen03G0033020.1 Rosmarinic Acid C4H low borderline
SOpen03G0033260.1 Rosmarinic Acid C4H medium pass
SOpen03G0036550.1 Rosmarinic Acid C4H low borderline
SOpen03G0037930.1 Rosmarinic Acid C4H low borderline
SOpen03G0039320.1 Rosmarinic Acid C4H low borderline
SOpen03G0039320.2 Rosmarinic Acid C4H low borderline
SOpen03G0040120.1 Rosmarinic Acid C4H low borderline
SOpen03G0040130.1 Rosmarinic Acid C4H low borderline
SOpen03G0040130.2 Rosmarinic Acid C4H medium pass
SOpen04G0000340.1 Rosmarinic Acid C4H low borderline
SOpen04G0000350.1 Rosmarinic Acid C4H low borderline
SOpen04G0000360.1 Rosmarinic Acid C4H low borderline
SOpen04G0002070.1 Rosmarinic Acid C4H low borderline