PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
SOpen01G0004880.1 Alkaloid IO medium borderline
SOpen01G0050340.1 Alkaloid IO low borderline
SOpen01G0050350.1 Alkaloid IO low borderline
SOpen01G0050360.1 Alkaloid IO low borderline
SOpen02G0033970.1 Alkaloid IO medium borderline
SOpen02G0034020.1 Alkaloid IO medium borderline
SOpen03G0028750.1 Alkaloid IO medium borderline
SOpen04G0004850.1 Alkaloid IO medium borderline
SOpen04G0011340.1 Alkaloid IO medium pass
SOpen04G0032230.1 Alkaloid IO medium borderline
SOpen06G0010550.1 Alkaloid IO medium borderline
SOpen06G0010560.1 Alkaloid IO medium borderline
SOpen07G0024290.1 Alkaloid IO low borderline
SOpen09G0002660.1 Alkaloid IO medium borderline
SOpen09G0002670.1 Alkaloid IO medium borderline
SOpen09G0021320.1 Alkaloid IO medium borderline
SOpen09G0034590.1 Alkaloid IO medium borderline
SOpen10G0006240.1 Alkaloid IO medium borderline
SOpen10G0032150.1 Alkaloid IO medium borderline
SOpen10G0032160.1 Alkaloid IO medium borderline
SOpen10G0033930.1 Alkaloid IO medium borderline
SOpen11G0001540.1 Alkaloid IO medium borderline
SOpen11G0002380.1 Alkaloid IO medium borderline
SOpen11G0027480.1 Alkaloid IO low borderline
SOpen12G0028490.1 Alkaloid IO medium borderline