PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
SOpen03G0034210.1 Flavonoid F3H medium borderline
SOpen03G0034220.1 Flavonoid F3H medium borderline
SOpen03G0034240.1 Flavonoid F3H medium borderline
SOpen03G0037790.1 Flavonoid F3H medium borderline
SOpen04G0002120.1 Flavonoid F3H medium borderline
SOpen04G0002840.1 Flavonoid F3H medium borderline
SOpen04G0003990.1 Flavonoid F3H medium borderline
SOpen04G0004000.1 Flavonoid F3H medium borderline
SOpen04G0019870.2 Flavonoid F3H low borderline
SOpen05G0013790.1 Flavonoid F3H low borderline
SOpen05G0030850.1 Flavonoid F3H medium borderline
SOpen06G0010290.1 Flavonoid F3H medium borderline
SOpen06G0014500.1 Flavonoid F3H medium borderline
SOpen06G0017780.1 Flavonoid F3H medium pass
SOpen06G0019190.1 Flavonoid F3H medium borderline
SOpen06G0019950.1 Flavonoid F3H low borderline
SOpen06G0024110.1 Flavonoid F3H medium borderline
SOpen06G0024120.1 Flavonoid F3H low borderline
SOpen06G0024130.1 Flavonoid F3H low borderline
SOpen06G0024140.1 Flavonoid F3H low borderline
SOpen06G0024540.1 Flavonoid F3H medium borderline
SOpen06G0026170.1 Flavonoid F3H medium borderline
SOpen06G0028430.1 Flavonoid F3H medium borderline
SOpen06G0028940.1 Flavonoid F3H medium borderline
SOpen06G0032440.1 Flavonoid F3H medium pass
SOpen06G0034310.1 Flavonoid F3H medium borderline
SOpen07G0013300.1 Flavonoid F3H medium borderline
SOpen07G0022020.1 Flavonoid F3H medium borderline
SOpen07G0022600.1 Flavonoid F3H medium borderline
SOpen07G0023880.1 Flavonoid F3H medium borderline
SOpen07G0023890.1 Flavonoid F3H medium borderline
SOpen07G0023910.1 Flavonoid F3H medium borderline
SOpen07G0027780.1 Flavonoid F3H medium borderline
SOpen07G0027800.1 Flavonoid F3H low borderline
SOpen07G0027810.1 Flavonoid F3H low borderline
SOpen07G0027820.1 Flavonoid F3H medium borderline
SOpen08G0001720.1 Flavonoid F3H medium borderline
SOpen08G0001720.2 Flavonoid F3H medium borderline
SOpen08G0025830.1 Flavonoid F3H low borderline
SOpen08G0027390.1 Flavonoid F3H medium borderline
SOpen09G0002820.1 Flavonoid F3H medium borderline
SOpen09G0003750.1 Flavonoid F3H medium borderline
SOpen09G0003760.1 Flavonoid F3H medium borderline
SOpen09G0003760.2 Flavonoid F3H medium borderline
SOpen09G0003780.1 Flavonoid F3H medium borderline
SOpen09G0027010.1 Flavonoid F3H medium borderline
SOpen09G0027030.1 Flavonoid F3H medium borderline
SOpen09G0031520.1 Flavonoid F3H medium borderline
SOpen09G0031620.1 Flavonoid F3H medium borderline
SOpen09G0031630.1 Flavonoid F3H medium borderline