PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
SOpen09G0031640.1 Flavonoid F3H medium borderline
SOpen09G0031650.1 Flavonoid F3H medium borderline
SOpen09G0031660.1 Flavonoid F3H medium borderline
SOpen09G0031670.1 Flavonoid F3H medium borderline
SOpen09G0031680.1 Flavonoid F3H medium borderline
SOpen09G0031690.1 Flavonoid F3H low borderline
SOpen09G0031710.1 Flavonoid F3H medium borderline
SOpen09G0031720.1 Flavonoid F3H medium borderline
SOpen09G0031730.1 Flavonoid F3H medium borderline
SOpen09G0031740.1 Flavonoid F3H medium borderline
SOpen09G0031750.1 Flavonoid F3H low borderline
SOpen09G0031760.1 Flavonoid F3H medium borderline
SOpen09G0031770.1 Flavonoid F3H medium borderline
SOpen09G0031780.1 Flavonoid F3H low borderline
SOpen10G0000140.1 Flavonoid F3H medium borderline
SOpen10G0000350.1 Flavonoid F3H medium borderline
SOpen10G0006300.1 Flavonoid F3H medium borderline
SOpen10G0027270.1 Flavonoid F3H medium borderline
SOpen10G0027280.1 Flavonoid F3H medium borderline
SOpen10G0027500.1 Flavonoid F3H medium borderline
SOpen10G0032430.1 Flavonoid F3H low borderline
SOpen10G0033660.1 Flavonoid F3H medium borderline
SOpen10G0035180.1 Flavonoid F3H medium borderline
SOpen11G0002750.1 Flavonoid F3H medium borderline
SOpen11G0004180.1 Flavonoid F3H medium borderline
SOpen11G0004190.1 Flavonoid F3H low borderline
SOpen11G0006200.1 Flavonoid F3H low borderline
SOpen11G0007170.1 Flavonoid F3H medium borderline
SOpen11G0007370.1 Flavonoid F3H medium borderline
SOpen11G0019310.1 Flavonoid F3H medium borderline
SOpen11G0020150.1 Flavonoid F3H medium borderline
SOpen11G0028750.1 Flavonoid F3H medium borderline
SOpen11G0028760.1 Flavonoid F3H medium borderline
SOpen11G0028770.1 Flavonoid F3H medium pass
SOpen11G0028780.1 Flavonoid F3H medium borderline
SOpen11G0028850.1 Flavonoid F3H medium pass
SOpen11G0028980.1 Flavonoid F3H medium borderline
SOpen12G0000890.1 Flavonoid F3H medium borderline
SOpen12G0001330.1 Flavonoid F3H medium borderline
SOpen12G0033800.1 Flavonoid F3H low borderline