PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

2174
Candidate Protein Records
1801
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SOpen10G0033610.1 Terpenoid FPPS medium pass
SOpen10G0033620.1 Terpenoid FPPS medium pass
SOpen12G0006740.1 Terpenoid FPPS medium pass
SOpen02G0029390.1 Terpenoid GGPPS medium borderline
SOpen02G0029400.1 Terpenoid GGPPS medium borderline
SOpen02G0029410.1 Terpenoid GGPPS medium borderline
SOpen04G0002860.2 Terpenoid GGPPS low borderline
SOpen04G0032540.1 Terpenoid GGPPS medium borderline
SOpen07G0029260.1 Terpenoid GGPPS medium borderline
SOpen08G0007630.1 Terpenoid GGPPS medium borderline
SOpen09G0002690.1 Terpenoid GGPPS medium borderline
SOpen11G0005020.1 Terpenoid GGPPS medium borderline
SOpen09G0034760.1 Terpenoid GPPS low borderline
SOpen09G0034760.2 Terpenoid GPPS low borderline
SOpen01G0050490.1 Terpenoid HDR/IspH high pass
SOpen08G0029620.1 Terpenoid HDS/IspG low borderline
SOpen11G0027100.1 Terpenoid HDS/IspG high pass
SOpen02G0011160.1 Terpenoid HMGR medium pass
SOpen02G0025920.1 Terpenoid HMGR medium pass
SOpen03G0004860.1 Terpenoid HMGR medium pass
SOpen03G0004870.1 Terpenoid HMGR medium pass
SOpen03G0023160.1 Terpenoid HMGR medium pass
SOpen09G0027860.1 Terpenoid HMGR low borderline
SOpen02G0001680.1 Terpenoid HMGS low borderline
SOpen06G0013410.1 Terpenoid HMGS low borderline
SOpen08G0002720.1 Terpenoid HMGS high pass
SOpen08G0027520.1 Terpenoid HMGS medium pass
SOpen08G0027530.1 Terpenoid HMGS high pass
SOpen12G0028040.1 Terpenoid HMGS high pass
SOpen04G0024300.1 Terpenoid IDI medium pass
SOpen05G0033170.1 Terpenoid IDI medium pass
SOpen01G0044220.1 Terpenoid MCT/IspD high pass
SOpen08G0028880.1 Terpenoid MDS/IspF high pass
SOpen00G0004670.1 Terpenoid MVD low borderline
SOpen03G0035800.1 Terpenoid MVD low borderline
SOpen04G0003800.1 Terpenoid MVD medium pass
SOpen06G0024950.1 Terpenoid MVD low borderline
SOpen11G0001890.1 Terpenoid MVD low borderline
SOpen11G0001940.1 Terpenoid MVD medium pass
SOpen01G0022960.1 Terpenoid MVK low borderline
SOpen01G0038890.1 Terpenoid MVK low borderline
SOpen01G0041380.1 Terpenoid MVK medium pass
SOpen01G0053320.1 Terpenoid MVK low borderline
SOpen04G0002940.1 Terpenoid MVK low borderline
SOpen00G0010620.1 Terpenoid PMK low borderline
SOpen02G0027640.1 Terpenoid PMK low borderline
SOpen06G0020710.1 Terpenoid PMK medium pass
SOpen08G0023780.1 Terpenoid PMK medium pass
SOpen00G0008990.1 Terpenoid TPS low borderline
SOpen01G0043650.1 Terpenoid TPS medium pass