PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

2174
Candidate Protein Records
1801
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SOpen11G0026700.1 Alkaloid NMT low borderline
SOpen12G0002690.1 Alkaloid NMT medium pass
SOpen12G0019550.1 Alkaloid NMT medium borderline
SOpen12G0031800.1 Alkaloid NMT medium pass
SOpen12G0033240.1 Alkaloid NMT medium pass
SOpen12G0033910.1 Alkaloid NMT medium pass
SOpen03G0028010.1 Alkaloid ODC medium pass
SOpen03G0028020.1 Alkaloid ODC medium pass
SOpen03G0028030.1 Alkaloid ODC medium pass
SOpen03G0028040.1 Alkaloid ODC medium pass
SOpen03G0028050.1 Alkaloid ODC medium pass
SOpen03G0028060.1 Alkaloid ODC medium pass
SOpen04G0034680.1 Alkaloid ODC medium pass
SOpen01G0029080.1 Alkaloid PMT medium pass
SOpen03G0002220.1 Alkaloid PMT medium borderline
SOpen03G0027260.1 Alkaloid PMT low borderline
SOpen03G0035510.1 Alkaloid PMT low borderline
SOpen04G0005610.1 Alkaloid PMT low borderline
SOpen04G0012830.1 Alkaloid PMT medium borderline
SOpen05G0000710.1 Alkaloid PMT medium borderline
SOpen06G0015960.1 Alkaloid PMT low borderline
SOpen06G0017600.1 Alkaloid PMT medium borderline
SOpen06G0017610.1 Alkaloid PMT medium borderline
SOpen07G0004790.1 Alkaloid PMT low borderline
SOpen07G0004810.1 Alkaloid PMT low borderline
SOpen07G0019610.1 Alkaloid PMT medium pass
SOpen07G0024050.1 Alkaloid PMT medium pass
SOpen07G0024060.1 Alkaloid PMT medium pass
SOpen07G0024090.1 Alkaloid PMT low borderline
SOpen08G0004230.1 Alkaloid PMT medium borderline
SOpen08G0016510.1 Alkaloid PMT medium pass
SOpen09G0029700.1 Alkaloid PMT medium pass
SOpen11G0009680.1 Alkaloid PMT low borderline
SOpen12G0031600.1 Alkaloid PMT low borderline
SOpen12G0031620.1 Alkaloid PMT low borderline
SOpen01G0035350.1 Alkaloid PYKS high pass
SOpen01G0052130.1 Alkaloid PYKS high pass
SOpen02G0013210.1 Alkaloid PYKS low borderline
SOpen02G0029550.1 Alkaloid PYKS low borderline
SOpen03G0000360.1 Alkaloid PYKS low borderline
SOpen03G0027240.1 Alkaloid PYKS low borderline
SOpen04G0033040.1 Alkaloid PYKS low borderline
SOpen05G0004020.1 Alkaloid PYKS low borderline
SOpen05G0004030.1 Alkaloid PYKS low borderline
SOpen05G0006950.1 Alkaloid PYKS low borderline
SOpen05G0030680.1 Alkaloid PYKS high pass
SOpen05G0031070.1 Alkaloid PYKS high pass
SOpen06G0012590.1 Alkaloid PYKS medium pass
SOpen06G0018010.1 Alkaloid PYKS low borderline
SOpen06G0018040.1 Alkaloid PYKS low borderline