Solanum pennellii (solanum_pennellii)
Imported from atlas release summary for Solanum pennellii.
2174
Candidate Protein Records
1801
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4679
Family-Level Calls
C4H
6.67%
C3'H/CYP98A
6.39%
BAHD
5.79%
UGT
4.06%
T3O
3.93%
UFGT
3.93%
4CL
3.91%
7DLGT
3.87%
Other Families
61.44%
More Families (98)
CYP76
179
3.83%
POD
170
3.63%
IFS
166
3.55%
F3H
140
2.99%
F3'H/CYP75B
121
2.59%
DWF4/CYP90B1
113
2.42%
BR6OX2/CYP85A2
107
2.29%
NMT
96
2.05%
CODM/T6ODM
82
1.75%
STR
79
1.69%
CYP71
76
1.62%
H6H
71
1.52%
SMT1/SMT2/SMT3
70
1.5%
CAD
58
1.24%
TRI/TRII
57
1.22%
TPS
45
0.96%
LAC
44
0.94%
TAT
44
0.94%
CAS
43
0.92%
GES
42
0.9%
CSE
40
0.85%
PAL
36
0.77%
SLS
34
0.73%
IFR
34
0.73%
COMT
34
0.73%
GS
32
0.68%
T16H
32
0.68%
PYKS
31
0.66%
7DLH
30
0.64%
BBE
29
0.62%
HCT
29
0.62%
CYP90D1
29
0.62%
FNS
27
0.58%
G8O/G8H
26
0.56%
IO
25
0.53%
ANR
24
0.51%
BR6OX1/CYP85A1
23
0.49%
SGD
22
0.47%
PMT
22
0.47%
16OMT
22
0.47%
F3'5'H/CYP75A
22
0.47%
F5H/CYP84A
21
0.45%
RAS
21
0.45%
ANS/LDOX
20
0.43%
CPD/CYP90A1
20
0.43%
TYDC_DDC
19
0.41%
NCS
19
0.41%
CCR
19
0.41%
LAMT
17
0.36%
CNMT
17
0.36%
CYP51G1
17
0.36%
8HGO
16
0.34%
SQS/FDFT1
13
0.28%
ROT3/CYP90C1
13
0.28%
DFR
12
0.26%
CYP80B1
11
0.24%
CCoAOMT
11
0.24%
CPR
11
0.24%
FPPS
11
0.24%
MPO
10
0.21%
TDC
10
0.21%
HPPR
10
0.21%
ISY
9
0.19%
GGPPS
9
0.19%
CHS
8
0.17%
AACT
8
0.17%
COR
7
0.15%
ODC
7
0.15%
SQE
7
0.15%
DET2
7
0.15%
MVD
6
0.13%
HMGS
6
0.13%
HMGR
6
0.13%
XMT_MXMT_DXMT
5
0.11%
CYP719
5
0.11%
MVK
5
0.11%
DXS
5
0.11%
CHI
4
0.09%
SMO1/SMO2
4
0.09%
HYD1
4
0.09%
PMK
4
0.09%
CYP80F1
3
0.06%
ADC
3
0.06%
6OMT_4OMT_SOMT
3
0.06%
FLS
3
0.06%
DWF5
3
0.06%
DWF7
3
0.06%
DWF1
2
0.04%
FK
2
0.04%
CMK/IspE
2
0.04%
IDI
2
0.04%
HDS/IspG
2
0.04%
GPPS
2
0.04%
CPI1
1
0.02%
MCT/IspD
1
0.02%
HDR/IspH
1
0.02%
DXR
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 514 | 19 | BAHD (198) | View species results |
| Alkaloid pathway | 375 | 22 | 7DLGT (87) | View species results |
| Phenylpropanoid pathway | 362 | 11 | POD (163) | View species results |
| Flavonoid pathway | 257 | 10 | UFGT (174) | View species results |
| Rosmarinic acid pathway | 191 | 7 | C4H (89) | View species results |
| Steroid pathway | 102 | 13 | SMT1/SMT2/SMT3 (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1868 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 321 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| SOpen03G0037930.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen04G0005070.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen04G0021560.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen04G0032690.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen05G0005680.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen05G0012460.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen06G0020190.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen06G0020210.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen07G0001250.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen07G0012300.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen07G0020030.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen07G0022040.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen07G0024720.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen07G0027950.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen07G0029250.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen07G0029740.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen10G0002780.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen10G0002790.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen10G0021710.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| SOpen11G0017010.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen11G0017010.2 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen12G0001830.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| SOpen01G0001710.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen01G0001710.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen01G0040100.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen01G0043530.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen01G0046920.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen01G0046930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen01G0046950.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen02G0025490.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen02G0026690.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| SOpen03G0002620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen03G0010730.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| SOpen03G0028870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen03G0031740.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen03G0032620.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| SOpen03G0032630.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| SOpen03G0032640.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| SOpen03G0038810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0001010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0004380.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0004390.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0006980.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0010580.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0010580.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0015310.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| SOpen04G0025900.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen04G0025900.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen05G0003180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| SOpen05G0013090.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |