PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
SOpen09G0029600.1 Rosmarinic Acid 4CL low borderline
SOpen09G0034350.1 Rosmarinic Acid 4CL low borderline
SOpen10G0004850.1 Rosmarinic Acid 4CL medium pass
SOpen11G0002840.1 Rosmarinic Acid 4CL medium pass
SOpen11G0008550.1 Rosmarinic Acid 4CL low borderline
SOpen11G0026760.1 Rosmarinic Acid 4CL medium pass
SOpen12G0002970.1 Rosmarinic Acid 4CL low borderline
SOpen12G0020460.1 Rosmarinic Acid 4CL medium pass
SOpen12G0030410.1 Rosmarinic Acid 4CL medium pass
SOpen12G0030420.1 Rosmarinic Acid 4CL medium pass
SOpen12G0033030.1 Rosmarinic Acid 4CL medium pass
SOpen00G0006980.1 Rosmarinic Acid C4H low borderline
SOpen00G0007720.1 Rosmarinic Acid C4H medium pass
SOpen00G0008630.1 Rosmarinic Acid C4H low borderline
SOpen01G0003160.1 Rosmarinic Acid C4H medium pass
SOpen01G0003170.1 Rosmarinic Acid C4H medium pass
SOpen01G0003190.1 Rosmarinic Acid C4H low borderline
SOpen01G0003880.1 Rosmarinic Acid C4H medium pass
SOpen01G0004880.1 Rosmarinic Acid C4H medium pass
SOpen01G0005100.1 Rosmarinic Acid C4H low borderline
SOpen01G0005720.1 Rosmarinic Acid C4H low borderline
SOpen01G0031490.1 Rosmarinic Acid C4H low borderline
SOpen01G0034600.2 Rosmarinic Acid C4H low borderline
SOpen01G0034600.3 Rosmarinic Acid C4H low borderline
SOpen01G0036890.1 Rosmarinic Acid C4H low borderline
SOpen01G0036910.1 Rosmarinic Acid C4H low borderline
SOpen01G0036920.1 Rosmarinic Acid C4H low borderline
SOpen01G0036930.1 Rosmarinic Acid C4H low borderline
SOpen01G0036940.1 Rosmarinic Acid C4H low borderline
SOpen01G0036940.2 Rosmarinic Acid C4H low borderline
SOpen01G0039040.1 Rosmarinic Acid C4H low borderline
SOpen01G0039050.1 Rosmarinic Acid C4H low borderline
SOpen01G0039390.1 Rosmarinic Acid C4H medium pass
SOpen01G0049440.1 Rosmarinic Acid C4H low borderline
SOpen01G0049440.2 Rosmarinic Acid C4H low borderline
SOpen01G0050340.1 Rosmarinic Acid C4H low borderline
SOpen02G0011990.1 Rosmarinic Acid C4H medium pass
SOpen02G0013960.1 Rosmarinic Acid C4H medium pass
SOpen02G0014320.1 Rosmarinic Acid C4H low borderline
SOpen02G0014350.1 Rosmarinic Acid C4H low borderline
SOpen02G0014360.1 Rosmarinic Acid C4H medium pass
SOpen02G0014370.1 Rosmarinic Acid C4H medium pass
SOpen02G0014970.1 Rosmarinic Acid C4H low borderline
SOpen02G0017730.1 Rosmarinic Acid C4H low borderline
SOpen02G0018670.1 Rosmarinic Acid C4H low borderline
SOpen02G0024030.1 Rosmarinic Acid C4H low borderline
SOpen02G0025720.1 Rosmarinic Acid C4H low borderline
SOpen02G0028240.1 Rosmarinic Acid C4H medium pass
SOpen02G0028410.1 Rosmarinic Acid C4H low borderline
SOpen02G0028600.1 Rosmarinic Acid C4H low borderline