PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

2174
Candidate Protein Records
1801
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SOpen05G0022370.1 Alkaloid TRI/TRII medium pass
SOpen05G0022370.2 Alkaloid TRI/TRII medium pass
SOpen06G0000700.1 Alkaloid TRI/TRII medium pass
SOpen06G0027190.1 Alkaloid TRI/TRII medium pass
SOpen06G0033850.1 Alkaloid TRI/TRII medium pass
SOpen06G0033860.1 Alkaloid TRI/TRII medium pass
SOpen07G0033780.1 Alkaloid TRI/TRII medium pass
SOpen08G0003300.1 Alkaloid TRI/TRII medium pass
SOpen08G0006850.1 Alkaloid TRI/TRII low borderline
SOpen09G0004240.1 Alkaloid TRI/TRII low borderline
SOpen09G0004890.1 Alkaloid TRI/TRII medium pass
SOpen09G0004890.2 Alkaloid TRI/TRII medium pass
SOpen09G0004900.1 Alkaloid TRI/TRII medium pass
SOpen09G0028260.1 Alkaloid TRI/TRII medium pass
SOpen10G0031070.1 Alkaloid TRI/TRII medium pass
SOpen10G0031070.2 Alkaloid TRI/TRII medium pass
SOpen10G0031650.1 Alkaloid TRI/TRII medium pass
SOpen10G0031660.1 Alkaloid TRI/TRII medium pass
SOpen10G0033840.1 Alkaloid TRI/TRII medium pass
SOpen10G0034080.1 Alkaloid TRI/TRII medium pass
SOpen10G0035020.1 Alkaloid TRI/TRII medium pass
SOpen11G0008570.1 Alkaloid TRI/TRII medium pass
SOpen12G0004840.1 Alkaloid TRI/TRII low borderline
SOpen12G0004840.2 Alkaloid TRI/TRII low borderline
SOpen12G0013280.1 Alkaloid TRI/TRII low borderline
SOpen12G0022300.1 Alkaloid TRI/TRII low borderline
SOpen12G0022390.1 Alkaloid TRI/TRII low borderline
SOpen12G0028220.1 Alkaloid TRI/TRII medium pass
SOpen12G0028240.1 Alkaloid TRI/TRII medium pass
SOpen12G0028250.1 Alkaloid TRI/TRII medium pass
SOpen12G0028260.1 Alkaloid TRI/TRII medium pass
SOpen12G0028330.1 Alkaloid TRI/TRII medium pass
SOpen12G0028380.1 Alkaloid TRI/TRII medium pass
SOpen12G0033840.1 Alkaloid TRI/TRII low borderline
SOpen01G0038870.1 Alkaloid TYDC_DDC low borderline
SOpen02G0002020.1 Alkaloid TYDC_DDC low borderline
SOpen03G0008450.1 Alkaloid TYDC_DDC medium borderline
SOpen07G0027220.1 Alkaloid TYDC_DDC medium borderline
SOpen07G0027770.1 Alkaloid TYDC_DDC medium borderline
SOpen08G0001680.1 Alkaloid TYDC_DDC low borderline
SOpen08G0001690.1 Alkaloid TYDC_DDC low borderline
SOpen08G0007130.1 Alkaloid TYDC_DDC medium borderline
SOpen08G0018970.1 Alkaloid TYDC_DDC low borderline
SOpen08G0019010.1 Alkaloid TYDC_DDC low borderline
SOpen08G0019020.1 Alkaloid TYDC_DDC low borderline
SOpen08G0019050.1 Alkaloid TYDC_DDC low borderline
SOpen08G0021370.1 Alkaloid TYDC_DDC low borderline
SOpen08G0021380.1 Alkaloid TYDC_DDC low borderline
SOpen08G0021390.1 Alkaloid TYDC_DDC low borderline
SOpen08G0021420.1 Alkaloid TYDC_DDC low borderline