PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
SOpen05G0031290.1 Alkaloid 7DLGT medium pass
SOpen05G0031360.1 Alkaloid 7DLGT low borderline
SOpen05G0032790.1 Alkaloid 7DLGT low borderline
SOpen05G0033240.1 Alkaloid 7DLGT medium pass
SOpen06G0001550.1 Alkaloid 7DLGT medium pass
SOpen06G0020510.1 Alkaloid 7DLGT medium pass
SOpen06G0020520.1 Alkaloid 7DLGT low borderline
SOpen06G0020560.1 Alkaloid 7DLGT medium pass
SOpen06G0028240.1 Alkaloid 7DLGT low borderline
SOpen06G0028250.1 Alkaloid 7DLGT low borderline
SOpen06G0028260.1 Alkaloid 7DLGT low borderline
SOpen06G0031940.1 Alkaloid 7DLGT high pass
SOpen06G0032680.1 Alkaloid 7DLGT low borderline
SOpen06G0032690.1 Alkaloid 7DLGT low borderline
SOpen07G0001820.1 Alkaloid 7DLGT low borderline
SOpen07G0001900.1 Alkaloid 7DLGT low borderline
SOpen07G0003110.1 Alkaloid 7DLGT medium pass
SOpen07G0021610.1 Alkaloid 7DLGT low borderline
SOpen07G0021620.1 Alkaloid 7DLGT low borderline
SOpen07G0021650.1 Alkaloid 7DLGT medium pass
SOpen07G0021700.1 Alkaloid 7DLGT medium pass
SOpen07G0021710.1 Alkaloid 7DLGT medium pass
SOpen07G0021720.1 Alkaloid 7DLGT low borderline
SOpen07G0021730.1 Alkaloid 7DLGT low borderline
SOpen07G0022000.1 Alkaloid 7DLGT low borderline
SOpen07G0022050.1 Alkaloid 7DLGT low borderline
SOpen07G0022070.1 Alkaloid 7DLGT low borderline
SOpen07G0022080.1 Alkaloid 7DLGT low borderline
SOpen08G0001310.1 Alkaloid 7DLGT medium pass
SOpen08G0001320.1 Alkaloid 7DLGT medium pass
SOpen08G0001330.1 Alkaloid 7DLGT medium pass
SOpen08G0001350.1 Alkaloid 7DLGT medium pass
SOpen08G0003700.1 Alkaloid 7DLGT low borderline
SOpen08G0003930.1 Alkaloid 7DLGT low borderline
SOpen08G0016830.1 Alkaloid 7DLGT low borderline
SOpen08G0024660.1 Alkaloid 7DLGT medium pass
SOpen09G0001850.1 Alkaloid 7DLGT medium pass
SOpen09G0001860.1 Alkaloid 7DLGT medium pass
SOpen09G0001900.1 Alkaloid 7DLGT low borderline
SOpen09G0002340.1 Alkaloid 7DLGT low borderline
SOpen09G0021300.1 Alkaloid 7DLGT low borderline
SOpen09G0031510.1 Alkaloid 7DLGT medium pass
SOpen09G0031530.1 Alkaloid 7DLGT medium pass
SOpen09G0034380.1 Alkaloid 7DLGT medium pass
SOpen09G0034390.1 Alkaloid 7DLGT medium pass
SOpen09G0034400.1 Alkaloid 7DLGT medium pass
SOpen09G0035010.1 Alkaloid 7DLGT medium pass
SOpen10G0003650.1 Alkaloid 7DLGT low borderline
SOpen10G0004390.1 Alkaloid 7DLGT low borderline
SOpen10G0028970.1 Alkaloid 7DLGT low borderline