PlantSME Plant secondary metabolism enzyme database

Solanum pennellii (solanum_pennellii)

Imported from atlas release summary for Solanum pennellii.

1801
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 514 19 BAHD (198) View species results
Alkaloid pathway 375 22 7DLGT (87) View species results
Phenylpropanoid pathway 362 11 POD (163) View species results
Flavonoid pathway 257 10 UFGT (174) View species results
Rosmarinic acid pathway 191 7 C4H (89) View species results
Steroid pathway 102 13 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 321 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
SOpen11G0026040.1 Terpenoid BAHD medium pass
SOpen11G0028140.1 Terpenoid BAHD medium pass
SOpen11G0028150.1 Terpenoid BAHD low borderline
SOpen12G0000400.1 Terpenoid BAHD low borderline
SOpen12G0000420.1 Terpenoid BAHD low borderline
SOpen12G0000430.1 Terpenoid BAHD low borderline
SOpen12G0001290.1 Terpenoid BAHD medium pass
SOpen12G0002720.1 Terpenoid BAHD medium pass
SOpen12G0002720.2 Terpenoid BAHD medium pass
SOpen12G0002900.1 Terpenoid BAHD medium pass
SOpen12G0002900.2 Terpenoid BAHD medium pass
SOpen12G0004600.1 Terpenoid BAHD low borderline
SOpen12G0005340.1 Terpenoid BAHD low borderline
SOpen12G0008820.1 Terpenoid BAHD medium pass
SOpen12G0008820.2 Terpenoid BAHD medium pass
SOpen12G0008820.3 Terpenoid BAHD medium pass
SOpen12G0008820.4 Terpenoid BAHD medium pass
SOpen12G0028010.1 Terpenoid BAHD medium pass
SOpen12G0029010.1 Terpenoid BAHD low borderline
SOpen12G0029170.1 Terpenoid BAHD low borderline
SOpen12G0029260.1 Terpenoid BAHD low borderline
SOpen12G0029270.1 Terpenoid BAHD medium pass
SOpen12G0029270.2 Terpenoid BAHD medium pass
SOpen12G0029280.1 Terpenoid BAHD medium pass
SOpen12G0031110.1 Terpenoid BAHD low borderline
SOpen12G0031600.1 Terpenoid BAHD low borderline
SOpen12G0031620.1 Terpenoid BAHD low borderline
SOpen12G0032600.1 Terpenoid BAHD medium pass
SOpen12G0032840.1 Terpenoid BAHD medium pass
SOpen01G0003500.1 Terpenoid CMK/IspE high pass
SOpen01G0007500.1 Terpenoid CMK/IspE low borderline
SOpen01G0003160.1 Terpenoid CYP71 medium borderline
SOpen01G0003170.1 Terpenoid CYP71 medium borderline
SOpen01G0003190.1 Terpenoid CYP71 medium borderline
SOpen01G0004550.1 Terpenoid CYP71 medium pass
SOpen01G0049560.1 Terpenoid CYP71 low borderline
SOpen01G0052230.1 Terpenoid CYP71 medium pass
SOpen02G0011840.1 Terpenoid CYP71 low borderline
SOpen02G0011990.1 Terpenoid CYP71 medium borderline
SOpen02G0025720.1 Terpenoid CYP71 medium borderline
SOpen02G0034160.1 Terpenoid CYP71 low borderline
SOpen02G0035830.1 Terpenoid CYP71 medium borderline
SOpen02G0035930.1 Terpenoid CYP71 low borderline
SOpen03G0011630.1 Terpenoid CYP71 medium borderline
SOpen03G0030010.1 Terpenoid CYP71 medium borderline
SOpen03G0030020.1 Terpenoid CYP71 medium borderline
SOpen03G0030030.1 Terpenoid CYP71 medium borderline
SOpen03G0030040.1 Terpenoid CYP71 medium borderline
SOpen03G0030050.1 Terpenoid CYP71 medium borderline
SOpen03G0030060.1 Terpenoid CYP71 medium borderline